Salmonella enterica subsp. enterica serovar London isolate N18-04674 |
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Putative Salmonella enterica subsp. enterica serovar London isolate N18-04674 RM systems
Ref: Bharat,A. unpublished
REBASE ref # 23824
| Sequence length: | GenBank #: | |
| Chromosome: | 4,666,130 bp | CP082929 |
| plasmid unnamed1: | 165,260 bp | CP082930 |
REBASE acronym: Sen4674
Org_num: 62497
All begin K6991_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1785 | cell division protein DamX | |||
| 1790 | M | M.StyTDamP (100% identity) | GATC | M.Sen4674DamP |
| 1795 | ribulose-phosphate 3-epimerase | |||
| 2275 | DUF2556 family protein | |||
| 2280 | M | M.SenTC177ORF2255P (100% identity) | ATGCAT | M.Sen4674ORF2280P |
| 2285 | DNA-binding transcriptional regulator Fis | |||
| 6570 | DUF4406 domain-containing protein | |||
| 6575 | M | M2.Sens8785ORF17265P (89% identity) | M.Sen4674ORF6575P | |
| 6580 | 79 aa hypothetical protein | |||
| 8885 | phosphohydrolase | |||
| 8890 | M | M.Sens29927DcmP (100% identity) | CCWGG | M.Sen4674DcmP |
| 8895 | V | V.StyTDcmP (100% identity) | CCWGG | V.Sen4674DcmP |
| 8900 | drug/metabolite exporter YedA | |||
| 14320 | replication endonuclease | |||
| 14325 | M | M.SenSP5ORF2922P (100% identity) | GATC | M.Sen4674ORF14325P |
| 14330 | TraR/DksA family transcriptional regulator | |||
| 19270 | YebC/PmpR family DNA-binding transcriptional | |||
| 19275 | R | SenZYXORFBP (100% identity) | Sen4674ORF19275P | |
| 19280 | toprim domain-containing protein | |||
| plasmid unnamed1 | ||||
| 22395 | RepB family plasmid replication initiator | |||
| 22400 | M | M.Sen60131ORF24255P (97% identity) | M.Sen4674ORF22400P | |
| 22405 | DUF1380 domain-containing protein | |||
| 22520 | 103 aa hypothetical protein | |||
| 22525 | M | M.Eco3936ORF27120P (98% identity) | M.Sen4674ORF22525P | |
| 22530 | 73 aa hypothetical protein | |||
| 22995 | ISL3 family transposase | |||
| 23000 | M | M.Sen59880ORF21225P (84% identity) | M.Sen4674ORF23000P | |
| 23005 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16865 | small effector SsaA | |||
| 16870 | R | Ssp6947IIP (100% identity) | CAGAG | Sen4674ORF16875P |
| 16875 | M | M.SensIBG7b4ORF17175P (100% identity) | CAGAG | M.Sen4674ORF16875P |
| 16880 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19130 | BrnT family toxin | |||
| 19135 | R | StyTMrrP (100% identity) | Sen4674MrrP | |
| 19140 | type I restriction-modification system | |||