Agrobacterium tumefaciens Yub001 |
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Putative Agrobacterium tumefaciens Yub001 RM systems
Ref: Chen,L. et al. unpublished
REBASE ref # 35356
| Sequence length: | GenBank #: | |
| chromosome circular: | 3,335,101 bp | CP048469 |
| chromosome linear: | 2,391,679 bp | CP048470 |
REBASE acronym: AtuYub001
Org_num: 62196
All begin FY156_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome circular | ||||
| 1010 | 291 aa hypothetical protein | |||
| 1015 | M | M.Pae14842ORFJP (90% identity) | M.AtuYub001ORF1015P | |
| 1020 | DNA topoisomerase III | |||
| 1025 | single-stranded DNA-binding protein | |||
| 1030 | M | M.Pae14842ORFIP (97% identity) | M.AtuYub001ORF1030P | |
| 1035 | DUF3158 family protein | |||
| 4475 | HNH endonuclease | |||
| 4480 | M | M.RspZX09ORF9135P (87% identity) | M.AtuYub001ORF4480P | |
| 4485 | 121 aa hypothetical protein | |||
| 4565 | ParB N-terminal domain-containing protein | |||
| 4570 | M | M.AfaK224ORF8765P (89% identity) | M.AtuYub001ORF4570P | |
| 4575 | 97 aa hypothetical protein | |||
| 9315 | AAA family ATPase | |||
| 9320 | M | M.AspB7ORF16430P (30% identity) | M.AtuYub001ORF9320P | |
| 9325 | 124 aa hypothetical protein | |||
| chromosome linear | ||||
| 23580 | 61 aa hypothetical protein | |||
| 23585 | M | M.Atu1108ORF34610P (97% identity) | M.AtuYub001ORF23585P | |
| 23590 | 116 aa hypothetical protein | |||
| 23600 | 122 aa hypothetical protein | |||
| 23605 | M | M.AtuBut002ORF20845P (96% identity) | M.AtuYub001ORF23605P | |
| 23610 | phosphoadenosine phosphosulfate reductase family | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome circular | ||||
| 2580 | 366 aa hypothetical protein | |||
| 2585 | M | M.Rsp2774ORF7980P (96% identity) | GANTC | M.AtuYub001ORF2585P |
| 2590 | HAD family phosphatase | |||