Escherichia coli BM28 lysU |
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Putative Escherichia coli BM28 lysU RM systems
Ref: McGuire,B.E. and Nano,F.E. unpublished
REBASE ref # 35372
Complete sequence: 4,520,110 bp
GenBank #: CP102379
REBASE acronym: EcoBM28U
Org_num: 62238
All begin NR350_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 21605 | endoribonuclease SymE | |||
| 21610 | S | S.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | S.EcoBM28UORF21615P |
| 21615 | M | M.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | M.EcoBM28UORF21615P |
| 21620 | R | Msa17ORFC2P (98% identity) | AACNNNNNNGTGC | EcoBM28UORF21615P |
| 21625 | adenine/cytosine-specific restriction | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9455 | drug/metabolite exporter YedA | |||
| 9460 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.EcoBM28UDcmP |
| 9465 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoBM28UDcmP |
| 9470 | phosphohydrolase | |||
| 15965 | DNA-binding transcriptional regulator Fis | |||
| 15970 | M | M.EcoBM28ORF15965P (100% identity) | ATGCAT | M.EcoBM28UORF15970P |
| 15975 | DUF2556 family protein | |||
| 16590 | ribulose-phosphate 3-epimerase | |||
| 16595 | M | M.EcoBM28DamP (100% identity) | GATC | M.EcoBM28UDamP |
| 16600 | cell division protein DamX | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 21620 | type I restriction-modification system | |||
| 21625 | R | SenHNK130MrrP (100% identity) | EcoBM28UMrrP | |
| 21630 | GTPase | |||