Escherichia coli JB41 |
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Putative Escherichia coli JB41 RM systems
Ref: McGuire,B.E. and Nano,F.E. unpublished
REBASE ref # 35372
Complete sequence: 4,652,288 bp
GenBank #: CP102378
REBASE acronym: EcoJB41
Org_num: 62244
All begin NR351_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 22305 | endoribonuclease SymE | |||
| 22310 | S | S.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | S.EcoJB41ORF22315P |
| 22315 | M | M.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | M.EcoJB41ORF22315P |
| 22320 | R | Msa17ORFC2P (98% identity) | AACNNNNNNGTGC | EcoJB41ORF22315P |
| 22325 | adenine/cytosine-specific restriction | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10190 | drug/metabolite exporter YedA | |||
| 10195 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.EcoJB41DcmP |
| 10200 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoJB41DcmP |
| 10205 | phosphohydrolase | |||
| 16725 | DNA-binding transcriptional regulator Fis | |||
| 16730 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcoJB41ORF16730P |
| 16735 | DUF2556 family protein | |||
| 17350 | ribulose-phosphate 3-epimerase | |||
| 17355 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoJB41DamP |
| 17360 | cell division protein DamX | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5985 | site-specific DNA recombinase | |||
| 5990 | R | SsoSE61ORF22640P (100% identity) | YCGR | EcoJB41ORF5990P |
| 5995 | isocitrate/isopropylmalate family dehydrogenase | |||
| 22320 | type I restriction-modification system | |||
| 22325 | R | SenHNK130MrrP (100% identity) | EcoJB41MrrP | |
| 22330 | GTPase | |||