Shewanella putrefaciens 4H |
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Putative Shewanella putrefaciens 4H RM systems
Ref: Chen,X. et al. unpublished
REBASE ref # 35401
Complete sequence: 4,589,493 bp
GenBank #: CP104755
REBASE acronym: Spu4M
Org_num: 62314
All begin N5094_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 10905 | 59 aa hypothetical protein | |||
| 10910 | R | SpuJNE2ORF9100P (98% identity) | Spu4MORF10930P | |
| 10915 | DUF86 domain-containing protein | |||
| 10920 | DUF1643 domain-containing protein | |||
| 10925 | S | S.ApoBE5ORFIP (51% identity) | S.Spu4MORF10930P | |
| 10930 | M | M.SpuJNE2ORF9100P (97% identity) | M.Spu4MORF10930P | |
| 10935 | helix-turn-helix domain-containing protein | |||
| 18240 | 185 aa hypothetical protein | |||
| 18245 | S | S.SpuCNORF3524P (61% identity) | S.Spu4MORF18250P | |
| 18250 | M | M.SpuCNORF3524P (94% identity) | M.Spu4MORF18250P | |
| 18255 | R | SpuCNORF3524P (99% identity) | Spu4MORF18250P | |
| 18260 | AlpA family transcriptional regulator | |||
| 20145 | helix-turn-helix transcriptional regulator | |||
| 20150 | M | M1.SpuCNORF3981P (100% identity) | M1.Spu4MORF20150P | |
| 20155 | DUF4062 domain-containing protein | |||
| 20160 | DNA binding domain-containing protein | |||
| 20165 | M | M2.SpuCNORF3981P (100% identity) | M2.Spu4MORF20150P | |
| 20170 | S | S.SpuCNORF3981P (100% identity) | S.Spu4MORF20150P | |
| 20175 | R | SpuCNORF3981P (100% identity) | Spu4MORF20150P | |
| 20180 | AAA family ATPase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1500 | ATP-binding protein | |||
| 1505 | M | M.SspW3ORF3844P (100% identity) | GATC | M.Spu4MDamP |
| 1510 | DUF2970 domain-containing protein | |||
| 3410 | 299 aa hypothetical protein | |||
| 3415 | M | M.MniGP59ORF4075P (52% identity) | M.Spu4MORF3415P | |
| 3420 | NERD domain-containing protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11300 | IS3-like element ISSpu4 family transposase | |||
| 11305 | R | Mmo2023ORF18300P (92% identity) | Spu4MORF11310P | |
| 11310 | M | M.ParAK049ORF17735P (52% identity) | M.Spu4MORF11310P | |
| 11315 | Abi family protein | |||