Escherichia coli PNUSAE008406 |
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Putative Escherichia coli PNUSAE008406 RM systems
Ref: Sangster,A. et al. unpublished
REBASE ref # 35304
| Sequence length: | GenBank #: | |
| Chromosome: | 5,486,468 bp | CP104647 |
| plasmid unnamed1: | 94,647 bp | CP104648 |
REBASE acronym: Eco8406
Org_num: 62245
All begin N5921_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14375 | endoribonuclease SymE | |||
| 14380 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco8406ORF14385P |
| 14385 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.Eco8406ORF14385P |
| 14390 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco8406ORF14385P |
| 14395 | DUF262 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 145 | 45 aa hypothetical protein | |||
| 155 | M | M.Eco8512ORF7295P (100% identity) | M.Eco8406ORF155P | |
| 160 | TrmB family transcriptional regulator | |||
| 770 | NinE family protein | |||
| 775 | M | M.Eph2851ORFAP (100% identity) | GATC | M.Eco8406ORF775P |
| 780 | recombination protein NinB | |||
| 3500 | NinE family protein | |||
| 3505 | M | M.EcoTWORF3263P (100% identity) | GATC | M.Eco8406ORF3505P |
| 3510 | NUMOD4 domain-containing protein | |||
| 3685 | 55 aa hypothetical protein | |||
| 3690 | M | M.EspP079ORF2847P (100% identity) | GATC | M.Eco8406ORF3690P |
| 3695 | DUF1382 family protein | |||
| 8385 | DNA-binding transcriptional regulator Fis | |||
| 8390 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco8406ORF8390P |
| 8395 | DUF2556 family protein | |||
| 8905 | ribulose-phosphate 3-epimerase | |||
| 8910 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco8406DamP |
| 8915 | cell division protein DamX | |||
| 12880 | 65 aa hypothetical protein | |||
| 12885 | M | M.EcosPA8ORF16100P (100% identity) | M.Eco8406ORF12885P | |
| 12890 | Eae protein | |||
| 14115 | transposase | |||
| 14120 | R | EcosPA8ORF17350P (100% identity) | Eco8406ORF14120P | |
| 14125 | N-acetylneuraminic acid mutarotase | |||
| 14155 | DEAD/DEAH box helicase | |||
| 14160 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco8406ORF14160P |
| 27415 | drug/metabolite exporter YedA | |||
| 27420 | V | V.EcosPA8DcmP (100% identity) | CCWGG | V.Eco8406DcmP |
| 27425 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco8406DcmP |
| 27430 | phosphohydrolase | |||
| plasmid unnamed1 | ||||
| 27980 | 73 aa hypothetical protein | |||
| 27985 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco8406ORF27985P | |
| 27990 | 101 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14360 | DUF1127 domain-containing protein | |||
| 14365 | R | Ecos1613GmrSP (100% identity) | Eco8406GmrSP | |
| 14370 | R | EcosPA8GmrSDP (55% identity) | Eco8406GmrDP | |
| 14375 | endoribonuclease SymE | |||