Escherichia coli E9 |
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Putative Escherichia coli E9 RM systems
Ref: Feng,A. et al. unpublished
REBASE ref # 35294
| Sequence length: | GenBank #: | |
| Chromosome: | 5,118,205 bp | CP104500 |
| plasmid p1: | 281,548 bp | CP104501 |
REBASE acronym: EcoE9
Org_num: 61964
All begin N5O75_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 415 | transposase | |||
| 420 | R | SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | EcoE9ORF425P |
| 425 | M | M.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | M.EcoE9ORF425P |
| 430 | S | S.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | S.EcoE9ORF425P |
| 435 | AAA family ATPase | |||
| 21895 | 128 aa hypothetical protein | |||
| 21900 | M | M.SflN101ORF11895P (100% identity) | TGANNNNNNTCCA | M.EcoE9ORF21900P |
| 21905 | S | S.SflN101ORF11895P (100% identity) | TGANNNNNNTCCA | S.EcoE9ORF21900P |
| 21910 | 428 aa hypothetical protein | |||
| 22025 | toll/interleukin-1 receptor domain-containing | |||
| 22030 | M | M.EcoYA1ORF20480P (100% identity) | M.EcoE9ORF22030P | |
| 22035 | S | S.EcoYA1ORF20480P (100% identity) | S.EcoE9ORF22030P | |
| 22040 | DUF4268 domain-containing protein | |||
| 22045 | R | EcoYA1ORF20480P (100% identity) | EcoE9ORF22030P | |
| 22050 | 165 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1965 | cell division protein DamX | |||
| 1970 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoE9DamP |
| 1975 | ribulose-phosphate 3-epimerase | |||
| 2520 | DUF2556 family protein | |||
| 2525 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoE9ORF2525P |
| 2530 | DNA-binding transcriptional regulator Fis | |||
| 9570 | TrmB family transcriptional regulator | |||
| 9575 | M | M.EcoE9ORF14690P (99% identity) | M.EcoE9ORF9575P | |
| 9585 | phage holin family protein | |||
| 10480 | TrmB family transcriptional regulator | |||
| 10485 | M | M.EcoPSS15ORF23680P (98% identity) | M.EcoE9ORF10485P | |
| 10500 | TerB family tellurite resistance protein | |||
| 14450 | drug/metabolite exporter YedA | |||
| 14455 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcoE9DcmP |
| 14460 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoE9DcmP |
| 14465 | phosphohydrolase | |||
| 14680 | phage holin family protein | |||
| 14690 | M | M.EcoE9ORF9575P (99% identity) | M.EcoE9ORF14690P | |
| 14695 | TrmB family transcriptional regulator | |||
| 16410 | replication endonuclease | |||
| 16415 | M | M.EcoR70ORF6410P (99% identity) | GATC | M.EcoE9ORF16415P |
| 16420 | TraR/DksA family transcriptional regulator | |||
| 17045 | NinE family protein | |||
| 17050 | M | M.EcoWN4ORF7335P (99% identity) | GATC | M.EcoE9ORF17050P |
| 17055 | recombination protein NinB | |||
| 18590 | DUF1317 domain-containing protein | |||
| 18595 | M | M.Sbo812ORFAP (100% identity) | GATC | M.EcoE9ORF18595P |
| 18600 | cell division protein ZapA | |||
| 21875 | HNH endonuclease | |||
| 21880 | R | Ecosa15ORFAP (95% identity) | EcoE9ORF21880P | |
| 21885 | AAA family ATPase | |||
| 22050 | 165 aa hypothetical protein | |||
| 22055 | R | EcoYA1ORF20505P (100% identity) | GAAC | EcoE9ORF22055P |
| 22060 | integrase arm-type DNA-binding domain-containing | |||
| 22825 | transposase | |||
| 22830 | R | SflFF80ORF21000P (100% identity) | YGGCCR | EcoE9ORF22835P |
| 22835 | M | M.SflFF80ORF21000P (100% identity) | YGGCCR | M.EcoE9ORF22835P |
| 22840 | integrase | |||
| plasmid p1 | ||||
| 26375 | 55 aa hypothetical protein | |||
| 26380 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.EcoE9ORF26380P |
| 26385 | thermonuclease family protein | |||
| 26485 | 48 aa hypothetical protein | |||
| 26490 | M | M.YpsF1ORFBP (100% identity) | M.EcoE9ORF26490P | |
| 26495 | 202 aa hypothetical protein | |||
| 26595 | DNA-binding protein | |||
| 26600 | M | M.YpsF1ORFDP (95% identity) | M.EcoE9ORF26600P | |
| 26605 | 284 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21880 | HNH endonuclease | |||
| 21885 | R | SflN101McrBP (100% identity) | EcoE9McrBP | |
| 21890 | R | SflN101McrCP (99% identity) | EcoE9McrCP | |
| 21895 | 128 aa hypothetical protein | |||