Salmonella species FORC89 |
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Putative Salmonella species FORC89 RM systems
Ref: Park,H. and Ryu,S. unpublished
REBASE ref # 28803
Complete sequence: 4,679,660 bp
GenBank #: CP029682
REBASE acronym: Ssp89
Org_num: 62008
All begin FORC89_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4013 | Type I restriction-modification system | |||
| 4014 | S | S.StySBLI (100% identity) | GGYANNNNNNTCG | S.Ssp89ORF4014P |
| 4015 | R | StySBLI (100% identity) | GGYANNNNNNTCG | Ssp89ORF4014P |
| 4016 | 306 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 370 | DamX an inner membrane protein involved in bile | |||
| 371 | M | M.StyTDamP (100% identity) | GATC | M.Ssp89DamP |
| 372 | Ribulose-phosphate 3-epimerase | |||
| 469 | 54 aa hypothetical protein | |||
| 470 | M | M.StyUK1III (100% identity) | ATGCAT | M.Ssp89ORF470P |
| 471 | DNA-binding protein Fis | |||
| 1823 | 157 aa hypothetical protein | |||
| 1824 | M | M.Sens21AORF8935P (100% identity) | GATC | M.Ssp89ORF1824P |
| 1825 | Holliday junction resolvase Crossover junction | |||
| 2841 | Very-short-patch mismatch repair endonuclease | |||
| 2842 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.Ssp89DcmP |
| 2843 | M | M.SspZ69DcmP (94% identity) | M.Ssp89DcmP | |
| 2844 | metal-dependent phosphohydrolase | |||
| 4043 | 241 aa hypothetical protein | |||
| ??? | R | SspSAL045ORF19515P (100% identity) | GAAC | Ssp89ORF4044P |
| 4046 | Mobile element protein | |||