Escherichia coli USDA-ARS-USMARC-50748 |
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Putative Escherichia coli USDA-ARS-USMARC-50748 RM systems
Ref: Harhay,D.M. et al. unpublished
REBASE ref # 35176
| Sequence length: | GenBank #: | |
| Chromosome: | 4,922,028 bp | CP104117 |
| plasmid pEc1-50748: | 126,915 bp | CP104118 |
| plasmid pEc2-50748: | 74,189 bp | CP104119 |
REBASE acronym: Eco50748
Org_num: 61571
All begin N1709_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2090 | cell division protein DamX | |||
| 2095 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco50748DamP |
| 2100 | ribulose-phosphate 3-epimerase | |||
| 2645 | DUF2556 family protein | |||
| 2650 | M | M.SspS13ORF21055P (99% identity) | ATGCAT | M.Eco50748ORF2650P |
| 2655 | DNA-binding transcriptional regulator Fis | |||
| 6460 | 116 aa hypothetical protein | |||
| 6465 | M | M.EcoS104ORF16470P (100% identity) | M.Eco50748ORF6465P | |
| 6470 | DUF1317 domain-containing protein | |||
| 8565 | PerC family transcriptional regulator | |||
| 8570 | M | M.EcoXH990ORF8990P (100% identity) | GATC | M.Eco50748ORF8570P |
| 8575 | LexA family transcriptional regulator | |||
| 9985 | phosphohydrolase | |||
| 9990 | M | M.SdyFF10DcmP (100% identity) | CCWGG | M.Eco50748DcmP |
| 9995 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.Eco50748DcmP |
| 10000 | drug/metabolite exporter YedA | |||
| 11945 | DUF977 family protein | |||
| 11950 | M | M.SsoSE61ORF20220P (100% identity) | M.Eco50748ORF11950P | |
| 11955 | 41 aa hypothetical protein | |||
| 18860 | 321 aa hypothetical protein | |||
| 18865 | R | Sso8033ORF3755P (100% identity) | CCWGG | Eco50748ORF18870P |
| 18870 | M | M.Sso8033ORF3755P (100% identity) | CCWGG | M.Eco50748ORF18870P |
| 18875 | 257 aa hypothetical protein | |||
| 19025 | phage holin, lambda family | |||
| 19030 | M | M.EcoXD35ORF23445P (100% identity) | M.Eco50748ORF19030P | |
| 19035 | 67 aa hypothetical protein | |||
| plasmid pEc1-50748 | ||||
| 24100 | 73 aa hypothetical protein | |||
| 24105 | M | M.EcoV04ORF25795P (100% identity) | SAY | M.Eco50748ORF24105P |
| 24110 | 103 aa hypothetical protein | |||
| plasmid pEc2-50748 | ||||
| 24825 | 97 aa hypothetical protein | |||
| 24830 | M | M.Xca80ORFEP (100% identity) | M.Eco50748ORF24830P | |
| 24835 | 73 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7580 | recombination protein NinB | |||
| 7585 | M | M.SflN97ORF8425P (100% identity) | GATC | M.Eco50748ORF7585P |
| 7590 | NinE family protein | |||
| 16040 | replication endonuclease | |||
| 16045 | M | M.EcoTCMB2ORF10935P (100% identity) | GATC | M.Eco50748ORF16045P |
| 16050 | TraR/DksA family transcriptional regulator | |||