Subdoligranulum variabile DSM 15176 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Subdoligranulum variabile DSM 15176 RM systems
Ref: Cheng,A.G. et al. unpublished
REBASE ref # 35114
Complete sequence: 3,244,954 bp
GenBank #: CP102293
REBASE acronym: Sva15176
Org_num: 62114
All begin NQ490_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3120 | DUF2188 domain-containing protein | |||
| 3125 | R | PmeBin25ORFEP (92% identity) | Sva15176ORF3150P | |
| 3130 | selenium binding protein | |||
| 3135 | 103 aa hypothetical protein | |||
| 3140 | 156 aa hypothetical protein | |||
| 3145 | S | S3.PmeBin714ORFAP (42% identity) | S.Sva15176ORF3150P | |
| 3150 | M | M.Osp192ORFEP (93% identity) | M.Sva15176ORF3150P | |
| 3155 | C | C.Cba2340ORFGP (86% identity) | C.Sva15176ORF3150P | |
| 3160 | 145 aa hypothetical protein | |||
| 8115 | M48 family metallopeptidase | |||
| 8120 | R | PmeBin356ORFEP (89% identity) | Sva15176ORF8150P | |
| 8125 | 52 aa hypothetical protein | |||
| 8130 | DUF6338 family protein | |||
| 8135 | S | S1.OspGH1ORFBP (51% identity) | S.Sva15176ORF8150P | |
| 8140 | 196 aa hypothetical protein | |||
| 8145 | virulence RhuM family protein | |||
| 8150 | M | M.PmeBin176ORFDP (89% identity) | M.Sva15176ORF8150P | |
| 8155 | restriction endonuclease subunit S | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6125 | 103 aa hypothetical protein | |||
| 6130 | M | M.PmeBin290ORFEP (70% identity) | M.Sva15176ORF6130P | |
| 6135 | helix-turn-helix transcriptional regulator | |||
| 6980 | AIPR family protein | |||
| 6985 | M | M.ObaJ115ORF4665P (71% identity) | M.Sva15176ORF6985P | |
| 6990 | V | V.PfaSt53ORF21490P (45% identity) | V.Sva15176ORF6985AP | |
| 6995 | IS21-like element helper ATPase IstB | |||
| 7000 | IS21 family transposase | |||
| ??? | V | V.PfaSt53ORF21490P (40% identity) | V.Sva15176ORF6985BP | |
| 7005 | methionyl-tRNA formyltransferase | |||
| 12305 | CD0415/CD1112 family protein | |||
| 12310 | M | M.PmeBin165ORFBP (95% identity) | M.Sva15176ORF12310P | |
| 12315 | 162 aa hypothetical protein | |||
| 12330 | nitrogen fixation protein | |||
| 12335 | M | M.Fpl30308ORF14875P (97% identity) | M.Sva15176ORF12335P | |
| 12340 | NlpC/P60 family protein | |||