Bacteroides species D2 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Bacteroides species D2 RM systems
Ref: Cheng,A.G. et al. unpublished
REBASE ref # 35114
Complete sequence: 6,955,292 bp
GenBank #: CP102261
REBASE acronym: BspD2a
Org_num: 61333
All begin NQ505_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 12525 | site-specific integrase | |||
| 12530 | S | S4.Pvu3C24ORF1473P (72% identity) | S4.BspD2aORF12550P | |
| 12535 | S | S3.Bov126ORF13095P (87% identity) | S3.BspD2aORF12550P | |
| 12540 | S | S3.Bth10582ORF1372P (92% identity) | S2.BspD2aORF12550P | |
| 12545 | S | S4.Bfi8840ORF2335P (77% identity) | S1.BspD2aORF12550P | |
| 12550 | M | M.Msa17ORFJ1P (100% identity) | M.BspD2aORF12550P | |
| 12555 | R | Bov145ORF1445P (100% identity) | BspD2aORF12550P | |
| 12560 | 408 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6830 | low temperature requirement protein A | |||
| 6835 | M | M.Uph2207ORFAP (100% identity) | M.BspD2aORF6835P | |
| 6840 | thymidylate synthase | |||
| 12870 | BREX system P-loop protein BrxC | |||
| 12875 | RM | Bno7935ORF20555P (74% identity) | BspD2aORF12875P | |
| 12880 | ATPase | |||
| 17530 | helix-turn-helix domain-containing protein | |||
| 17535 | RM | PmeBin13ORFEP (100% identity) | BspD2aORF17540P | |
| 17540 | M | M.PmeBin13ORFEP (100% identity) | M.BspD2aORF17540P | |
| 17545 | 4Fe-4S binding protein | |||
| 18760 | 65 aa hypothetical protein | |||
| 18765 | M | M.Bov733ORF4185P (96% identity) | M.BspD2aORF18765P | |
| 18770 | DUF3560 domain-containing protein | |||
| 19430 | 77 aa hypothetical protein | |||
| 19435 | M | M.Bfa527ORF16685P (98% identity) | M.BspD2aORF19435P | |
| 19440 | 156 aa hypothetical protein | |||
| 19685 | helix-turn-helix domain containing protein | |||
| 19690 | M | M.BxyC03ORF1440P (100% identity) | M.BspD2aORF19690P | |
| 19695 | 315 aa hypothetical protein | |||
| 20565 | helix-turn-helix domain-containing protein | |||
| 20570 | M | CspF0545ORF6450P (51% identity) | M.BspD2aORF20570AP | |
| 20575 | DEAD/DEAH box helicase family protein | |||
| 20580 | M | M2.Sac1ORF6265P (14% identity) | M.BspD2aORF20570BP | |
| 20585 | DUF6078 family protein | |||