Clostridioides difficile CD099 |
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Putative Clostridioides difficile CD099 RM systems
Ref: Su,T. et al. unpublished
REBASE ref # 35148
| Sequence length: | GenBank #: | |
| Chromosome: | 4,254,228 bp | CP081019 |
| plasmid pCD099: | 48,593 bp | CP081020 |
REBASE acronym: Cdi099
Org_num: 61393
All begin K2218_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4400 | 159 aa hypothetical protein | |||
| 4405 | M | M.PdiBJ08ORFAP (100% identity) | AYGNNNNNNCTG | M.Cdi099ORF4405P |
| 4410 | S | S.PdiBJ08ORFAP (100% identity) | AYGNNNNNNCTG | S.Cdi099ORF4405P |
| 4415 | 150 aa hypothetical protein | |||
| 4420 | 106 aa hypothetical protein | |||
| 4425 | 300 aa hypothetical protein | |||
| 4430 | R | PdiBJ08ORFAP (100% identity) | AYGNNNNNNCTG | Cdi099ORF4405P |
| 4435 | 48 aa hypothetical protein | |||
| 5005 | tagatose-bisphosphate aldolase subunit GatY | |||
| 5010 | M | M.PdiBJ08ORFBP (100% identity) | TAGNNNNNRTGAA | M.Cdi099ORF5010P |
| 5015 | S | S.PdiBJ08ORFBP (100% identity) | TAGNNNNNRTGAA | S.Cdi099ORF5010P |
| 5020 | 102 aa hypothetical protein | |||
| 5025 | nucleotidyltransferase domain-containing | |||
| 5030 | 142 aa hypothetical protein | |||
| 5035 | R | PdiBJ08ORFBP (100% identity) | TAGNNNNNRTGAA | Cdi099ORF5010P |
| 5040 | DUF262 domain-containing HNH endonuclease family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6330 | Rrf2 family transcriptional regulator | |||
| 6335 | M | M.PdiBJ08ORFCP (100% identity) | CAAAAA | M.Cdi099ORF6335P |
| 6340 | patatin-like phospholipase family protein | |||
| plasmid pCD099 | ||||
| 19585 | BlaI/MecI/CopY family transcriptional regulator | |||
| 19590 | M | M.CdiT4ORF19985P (100% identity) | M.Cdi099ORF19590P | |
| 19595 | N-acetylmuramoyl-L-alanine amidase | |||