Clostridioides difficile G89 |
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Putative Clostridioides difficile G89 RM systems
Ref: Su,T. et al. unpublished
REBASE ref # 35148
| Sequence length: | GenBank #: | |
| Chromosome: | 4,240,344 bp | CP081021 |
| plasmid pG89: | 48,593 bp | CP081022 |
REBASE acronym: CdiG89
Org_num: 61396
All begin K2215_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16215 | DUF262 domain-containing HNH endonuclease family | |||
| 16220 | R | PdiBJ08ORFBP (100% identity) | TAGNNNNNRTGAA | CdiG89ORF16245P |
| 16225 | 142 aa hypothetical protein | |||
| 16230 | nucleotidyltransferase domain-containing | |||
| 16235 | 102 aa hypothetical protein | |||
| 16240 | S | S.PdiBJ08ORFBP (100% identity) | TAGNNNNNRTGAA | S.CdiG89ORF16245P |
| 16245 | M | M.PdiBJ08ORFBP (100% identity) | TAGNNNNNRTGAA | M.CdiG89ORF16245P |
| 16250 | tagatose-bisphosphate aldolase subunit GatY | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14360 | RusA family crossover junction | |||
| 14365 | M | M.Pdi630ORF9350P (100% identity) | TGGCCA | M.CdiG89ORF14365P |
| 14370 | zinc-ribbon domain-containing protein | |||
| 14905 | patatin-like phospholipase family protein | |||
| 14910 | M | M.PdiBJ08ORFCP (100% identity) | CAAAAA | M.CdiG89ORF14910P |
| 14915 | Rrf2 family transcriptional regulator | |||
| plasmid pG89 | ||||
| 19660 | BlaI/MecI/CopY family transcriptional regulator | |||
| 19665 | M | M.CdiT4ORF19985P (100% identity) | M.CdiG89ORF19665P | |
| 19670 | N-acetylmuramoyl-L-alanine amidase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10965 | sigma 54-interacting transcriptional regulator | |||
| 10970 | R | PdiBJ08McrCP (100% identity) | CdiG89McrCP | |
| 10975 | R | PdiBJ08McrBP (100% identity) | CdiG89McrBP | |
| 10980 | cell division protein | |||