Escherichia coli 3045 |
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Putative Escherichia coli 3045 RM systems
Ref: Shropshire,W.C. et al. mSystems (2022) In press
REBASE ref # 35163
| Sequence length: | GenBank #: | |
| Chromosome: | 4,752,362 bp | CP103570 |
| plasmid pMB8093_1: | 166,880 bp | CP103571 |
| plasmid pMB8093_2: | 94,670 bp | CP103572 |
REBASE acronym: Eco3045
Org_num: 61517
All begin M5S79_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8885 | LysM domain-containing protein | |||
| 8890 | M | M.Sen64034II (100% identity) | AGCNNNNNCTTC | M.Eco3045ORF8890P |
| 8895 | S | S.KpnS1319ORF2280P (100% identity) | AGCNNNNNCTTC | S.Eco3045ORF8890P |
| 8900 | restriction system-associated AAA family ATPase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1685 | cell division protein DamX | |||
| 1690 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco3045DamP |
| 1695 | ribulose-phosphate 3-epimerase | |||
| 2310 | DUF2556 family protein | |||
| 2315 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco3045ORF2315P |
| 2320 | DNA-binding transcriptional regulator Fis | |||
| 9160 | phosphohydrolase | |||
| 9165 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.Eco3045DcmP |
| 9170 | V | V.SflSTLE1DcmP (100% identity) | V.Eco3045DcmP | |
| 9175 | drug/metabolite exporter YedA | |||
| 19240 | HNH endonuclease | |||
| 19245 | R | SflSTLE4ORF19250P (100% identity) | Eco3045ORF19245P | |
| 19250 | McrC family protein | |||
| 19645 | sigma 54-interacting transcriptional regulator | |||
| 19650 | R | Ecop10BORF20145P (100% identity) | Eco3045ORF19650P | |
| 19655 | IS21-like element IS100 family transposase | |||
| 20980 | phage holin, lambda family | |||
| 20985 | M | M.SflLIN17ORF17405P (99% identity) | M.Eco3045ORF20985P | |
| 20990 | 67 aa hypothetical protein | |||
| 21025 | LexA family transcriptional regulator | |||
| 21030 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco3045ORF21030P |
| 21035 | PerC family transcriptional regulator | |||
| plasmid pMB8093_1 | ||||
| 22895 | 103 aa hypothetical protein | |||
| 22900 | M | M.KpnVA569ORF28145P (100% identity) | M.Eco3045ORF22900P | |
| 22905 | 73 aa hypothetical protein | |||
| plasmid pMB8093_2 | ||||
| 24395 | 103 aa hypothetical protein | |||
| 24400 | M | M.EcoSO172ORF25620P (100% identity) | SAY | M.Eco3045ORF24400P |
| 24405 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19245 | HNH endonuclease | |||
| 19250 | R | SflSTLE4McrCP (100% identity) | Eco3045McrCP | |
| 19255 | R | SflSTLE4McrBP (100% identity) | Eco3045McrBP | |
| 19260 | DUF4942 domain-containing protein | |||