Escherichia coli HH194M |
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Putative Escherichia coli HH194M RM systems
Ref: Li,R. unpublished
REBASE ref # 31585
| Sequence length: | GenBank #: | |
| Chromosome: | 4,676,608 bp | CP101513 |
| plasmid pHH194M-140K: | 140,492 bp | CP101514 |
| plasmid pHH194M-228K: | 228,609 bp | CP101516 |
| plasmid pHH194M-88K: | 88,459 bp | CP101515 |
REBASE acronym: Eco194M
Org_num: 61545
All begin MOO21_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9115 | 388 aa hypothetical protein | |||
| 9120 | M | M.EcoVEF10ORF18030P (100% identity) | M.Eco194MORF9120P | |
| 9125 | S | S1.EcoVEF10ORF18030P (100% identity) | S.Eco194MORF9120P | |
| 9130 | YecA family protein | |||
| 9135 | cold shock domain-containing protein | |||
| 9140 | R | EcoAH25ORF10605P (100% identity) | Eco194MORF9120P | |
| 9145 | M48 family metallopeptidase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1725 | cell division protein DamX | |||
| 1730 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco194MDamP |
| 1735 | ribulose-phosphate 3-epimerase | |||
| 2365 | DUF2556 family protein | |||
| 2370 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco194MORF2370P |
| 2375 | DNA-binding transcriptional regulator Fis | |||
| 8830 | phosphohydrolase | |||
| 8835 | M | M.SspS13DcmP (100% identity) | CCWGG | M.Eco194MDcmP |
| 8840 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.Eco194MDcmP |
| 8845 | drug/metabolite exporter YedA | |||
| 14750 | replication endonuclease | |||
| 14755 | M | M.EcoSCU204ORF10940P (100% identity) | GATC | M.Eco194MORF14755P |
| 14760 | TraR/DksA family transcriptional regulator | |||
| 19210 | phage lysis protein EssD | |||
| 19215 | M | M.Sso63633ORF22290P (100% identity) | M.Eco194MORF19215P | |
| 19220 | 67 aa hypothetical protein | |||
| 19250 | LexA family transcriptional regulator | |||
| 19255 | M | M.SdyFF10ORF21495P (100% identity) | GATC | M.Eco194MORF19255P |
| 19260 | PerC family transcriptional regulator | |||
| 19700 | HNH endonuclease | |||
| 19705 | R | SflFF17ORF19275P (100% identity) | Eco194MORF19705P | |
| 19710 | McrC family protein | |||
| plasmid pHH194M-228K | ||||
| 24345 | 284 aa hypothetical protein | |||
| 24350 | M | M.YpsF1ORFDP (100% identity) | GATC | M.Eco194MORF24350P |
| 24355 | DNA-binding protein | |||
| 24465 | 202 aa hypothetical protein | |||
| 24470 | M | M.YpsF1ORFBP (100% identity) | M.Eco194MORF24470P | |
| 24475 | 48 aa hypothetical protein | |||
| 24965 | thermonuclease family protein | |||
| 24970 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.Eco194MORF24970P |
| 24975 | 55 aa hypothetical protein | |||
| plasmid pHH194M-88K | ||||
| 23455 | 101 aa hypothetical protein | |||
| 23460 | M | M.SflFF3ORF25360P (100% identity) | SAY | M.Eco194MORF23460P |
| 23465 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pHH194M-140K | ||||
| 23140 | 415 aa hypothetical protein | |||
| 23145 | R | EcoHS301ORF23870P (100% identity) | Eco194MORF23150P | |
| 23150 | M | M.EcoHS301ORF23870P (100% identity) | M.Eco194MORF23150P | |
| 23155 | DUF4391 domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19705 | HNH endonuclease | |||
| 19710 | R | SflFF17McrCP (100% identity) | Eco194MMcrCP | |
| 19715 | R | SflSTLE4McrBP (100% identity) | Eco194MMcrBP | |
| 19720 | DUF4942 domain-containing protein | |||