Burkholderia contaminans DM32 |
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Putative Burkholderia contaminans DM32 RM systems
Ref: Zhou,G. et al. unpublished
REBASE ref # 35076
| Sequence length: | GenBank #: | |
| chromosome 1: | 3,812,061 bp | CP102482 |
| chromosome 2: | 3,173,531 bp | CP102483 |
| chromosome 4: | 249,693 bp | CP102485 |
REBASE acronym: BcoDM32
Org_num: 61052
All begin NTJ56_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 25 | helix-turn-helix domain-containing protein | |||
| 30 | R | Cfu331ORF5P (85% identity) | BcoDM32ORF35P | |
| 35 | M | M.Pch7ORF11835P (87% identity) | M.BcoDM32ORF35P | |
| 40 | S | S.GspEPRMORF9300P (52% identity) | S.BcoDM32ORF35P | |
| 45 | IS3 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 5890 | DUF2514 domain-containing protein | |||
| 5895 | M | M.BpyBX1ORF10260P (97% identity) | M.BcoDM32ORF5895P | |
| 5900 | 208 aa hypothetical protein | |||
| 7025 | 133 aa hypothetical protein | |||
| 7030 | M | M.Bmu379ORF11455P (83% identity) | M.BcoDM32ORF7030P | |
| 7035 | RNA-directed DNA polymerase | |||
| chromosome 2 | ||||
| 29150 | tryptophan synthase subunit alpha | |||
| 29155 | M | M.EsaSS388ORFAP (100% identity) | GTWWAC | M.BcoDM32ORF29155P |
| 29160 | tryptophan synthase subunit beta | |||
| chromosome 4 | ||||
| 38215 | 168 aa hypothetical protein | |||
| ??? | M | M.BcePS27ORF7027P (99% identity) | M.BcoDM32ORF38220P | |
| 38225 | 146 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 195 | 84 aa hypothetical protein | |||
| 200 | R | Bco14ORF19355P (99% identity) | CACAG | BcoDM32ORF205P |
| 205 | M | M.Bcot1ORF25560P (99% identity) | CACAG | M.BcoDM32ORF205P |
| 210 | porin | |||