Pimelobacter simplex N40 |
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Putative Pimelobacter simplex N40 RM systems
Ref: Yan,L. et al. Microorganisms 10 (8), 1496 (2022)
REBASE ref # 35093
| Sequence length: | GenBank #: | |
| Chromosome: | 6,090,923 bp | CP096276 |
| plasmid p1-N40: | 110,947 bp | CP096277 |
| plasmid p2-N40: | 61,745 bp | CP096278 |
REBASE acronym: PsiN40
Org_num: 61127
All begin M0M48_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12155 | CHAT domain-containing protein | |||
| 12160 | M | M1.PsiN40ORF24235P (100% identity) | M1.PsiN40ORF12160P | |
| 12165 | M | M2.PsiN40ORF24235P (100% identity) | M2.PsiN40ORF12160P | |
| 12170 | S | S.PsiN40ORF24235P (100% identity) | S.PsiN40ORF12160P | |
| 12175 | R | PsiN40ORF24235P (100% identity) | PsiN40ORF12160P | |
| 12180 | TnsA-like heteromeric transposase endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1005 | IS256 family transposase | |||
| 1010 | R | MfaA001ORF23885P (37% identity) | PsiN40ORF1010P | |
| 1015 | DUF1998 domain-containing protein | |||
| 1050 | sigma-70 family RNA polymerase sigma factor | |||
| 1055 | M | M.PsiN39ORF12425P (100% identity) | M.PsiN40ORF1055P | |
| 1060 | 107 aa hypothetical protein | |||
| 7455 | 75 aa hypothetical protein | |||
| 7465 | R | PsiN39ORF18820P (100% identity) | PsiN40ORF7470P | |
| 7470 | M | M.PsiN39ORF18820P (100% identity) | M.PsiN40ORF7470P | |
| 7475 | Swt1 family HEPN domain-containing protein | |||
| 10455 | YfdQ family protein | |||
| 10460 | M | M.PsiN39ORF21815P (100% identity) | M.PsiN40ORF10460P | |
| 10465 | DEAD/DEAH box helicase | |||
| 10465 | DEAD/DEAH box helicase | |||
| 10470 | M | M.PsiN39ORF21825P (100% identity) | M.PsiN40ORF10470P | |
| 10475 | 142 aa hypothetical protein | |||
| 10880 | RusA family crossover junction | |||
| 10885 | M | M.PsiN39ORF22240P (100% identity) | M.PsiN40ORF10885P | |
| 10890 | 442 aa hypothetical protein | |||
| 14155 | 283 aa hypothetical protein | |||
| 14160 | M | M.PsiN39ORF25510P (100% identity) | M.PsiN40ORF14160P | |
| 14165 | PIG-L family deacetylase | |||
| 24400 | 64 aa hypothetical protein | |||
| 24405 | M | M.PsiN39ORF5900P (100% identity) | M.PsiN40ORF24405P | |
| 24410 | thermonuclease family protein | |||
| plasmid p1-N40 | ||||
| 30450 | restriction endonuclease | |||
| 30455 | M | M.PsiN39ORF30435P (100% identity) | M.PsiN40ORF30455P | |
| 30460 | 293 aa hypothetical protein | |||
| plasmid p2-N40 | ||||
| 30620 | 136 aa hypothetical protein | |||
| 30625 | M | M.PsiN39ORF30605P (100% identity) | M.PsiN40ORF30625P | |
| 30630 | 46 aa hypothetical protein | |||