Clostridioides difficile UK 012 |
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Putative Clostridioides difficile UK 012 RM systems
Ref: Hain-Saunders,N.M.R. and Knight,D.R. unpublished
REBASE ref # 34979
Complete sequence: 4,492,437 bp
GenBank #: CP102397
REBASE acronym: Cdi012
Org_num: 60991
All begin NQ182_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6690 | patatin-like phospholipase family protein | |||
| 6695 | M | M.PdiZ31ORF1541P (100% identity) | CAAAAA | M.Cdi012ORF6695P |
| 6700 | Rrf2 family transcriptional regulator | |||
| 8295 | class B sortase | |||
| 8300 | M | M.Pdi6602ORF710333P (100% identity) | GCNGC | M.Cdi012ORF8300P |
| 8305 | DrmE family protein | |||
| 13050 | 91 aa hypothetical protein | |||
| 13055 | M | M.CdiRS35ORF15425P (100% identity) | M.Cdi012ORF13055P | |
| 13060 | 73 aa hypothetical protein | |||
| 14395 | type II toxin-antitoxin system Phd/YefM family | |||
| 14400 | M | M1.CscMO32ORF1382P (77% identity) | M1.Cdi012ORF14400P | |
| 14405 | M | M2.CscMO32ORF1382P (80% identity) | M2.Cdi012ORF14400P | |
| 14410 | R | R1.CscMO32ORF1382P (67% identity) | R1.Cdi012ORF14400P | |
| 14415 | R | R1.Lba4ORF19420P (70% identity) | R2.Cdi012ORF14400P | |
| 14420 | 401 aa hypothetical protein | |||
| 14520 | 43 aa hypothetical protein | |||
| 14525 | M | M1.CspM240ORF613P (82% identity) | M.Cdi012ORF14525P | |
| 14530 | DNA cytosine methyltransferase | |||
| 14525 | site-specific DNA-methyltransferase | |||
| 14530 | M | M1.Cce743ORF3986P (61% identity) | M.Cdi012ORF14530P | |
| 14535 | virulence | |||
| 17375 | zinc-ribbon domain-containing protein | |||
| 17380 | M | M.Pdi630ORF9350P (100% identity) | TGGCCA | M.Cdi012ORF17380P |
| 17385 | RusA family crossover junction | |||
| 18265 | 91 aa hypothetical protein | |||
| 18270 | M | M.CdiS122ORF7470P (100% identity) | M.Cdi012ORF6190P | |
| 18275 | 69 aa hypothetical protein | |||
| 18765 | CHAP domain-containing protein | |||
| 18770 | M | M.Pdi630ORF11090P (100% identity) | CCSSGG | M.Cdi012ORF18770P |
| 18775 | ATP-binding protein | |||