Clostridium perfringens JXNC-3B |
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Putative Clostridium perfringens JXNC-3B RM systems
Ref: Yang,B. unpublished
REBASE ref # 35030
| Sequence length: | GenBank #: | |
| Chromosome: | 3,293,373 bp | CP102300 |
| plasmid unnamed1: | 75,433 bp | CP102303 |
| plasmid unnamed2: | 66,540 bp | CP102304 |
REBASE acronym: Cpe3B
Org_num: 60885
All begin NQ194_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5235 | KAP family NTPase | |||
| 5240 | R | CpeBNCPORF4955P (99% identity) | Cpe3BORF5245P | |
| 5245 | M | M.CpeBNCPORF4955P (100% identity) | M.Cpe3BORF5245P | |
| 5250 | S | S.CpeBNCPORF4955P (100% identity) | S.Cpe3BORF5245P | |
| 5255 | KAP family NTPase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7570 | type II CRISPR RNA-guided endonuclease Cas9 | |||
| 7575 | RM | CpeA17ORF7590P (99% identity) | Cpe3BORF7575P | |
| 7580 | BREX system P-loop protein BrxC | |||
| 7715 | 112 aa hypothetical protein | |||
| 7720 | RM | Ehi1013ORF1235P (23% identity) | Cpe3BORF7720P | |
| 7725 | pseudogene | |||
| 10315 | 147 aa hypothetical protein | |||
| 10320 | M | M.Cpe80ORF6205P (97% identity) | M.Cpe3BORF10320P | |
| 10325 | helix-turn-helix domain-containing protein | |||
| 14810 | peptide-methionine (S)-S-oxide reductase MsrA | |||
| 14815 | M | M.Cpe53kr1ORF14595P (99% identity) | GTATAC | M.Cpe3BORF14815P |
| 14820 | YhgE/Pip domain-containing protein | |||
| plasmid unnamed1 | ||||
| 15655 | 101 aa hypothetical protein | |||
| 15660 | M | M.CpeJP55ORF39P (98% identity) | M.Cpe3BORF15660P | |
| 15665 | 57 aa hypothetical protein | |||
| plasmid unnamed2 | ||||
| 15860 | 72 aa hypothetical protein | |||
| 15865 | M | M.CpeTS1ORF30130P (100% identity) | CTGCAG | M.Cpe3BORF15865P |
| 15870 | R | Cpe8ORF15350P (100% identity) | CTGCAG | Cpe3BORF15865P |
| 15875 | ImmA/IrrE family metallo-endopeptidase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5225 | 99 aa hypothetical protein | |||
| 5230 | R | CpeA17ORF5320P (98% identity) | Cpe3BORF5230P | |
| 5235 | KAP family NTPase | |||