Clostridium perfringens JXNC-DD |
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Putative Clostridium perfringens JXNC-DD RM systems
Ref: Yang,B. unpublished
REBASE ref # 35030
| Sequence length: | GenBank #: | |
| Chromosome: | 3,249,014 bp | CP102297 |
| plasmid unnamed1: | 46,499 bp | CP102298 |
REBASE acronym: CpeDD
Org_num: 60886
All begin NQ193_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4765 | ribosomal protein L7/L12 | |||
| 4770 | R | Cpe904ORF12760P (99% identity) | GATC | CpeDDORF4775P |
| 4775 | M | M.Cpe10240ORF961P (99% identity) | GATC | M.CpeDDORF4775P |
| 4780 | HNH endonuclease | |||
| 4775 | DNA cytosine methyltransferase | |||
| 4780 | R | CpeHS16ORF4840P (94% identity) | CpeDDORF4780P | |
| 4785 | 462 aa hypothetical protein | |||
| 14280 | peptide-methionine (S)-S-oxide reductase MsrA | |||
| 14285 | M | M.CpeS1ORF810P (100% identity) | GTATAC | M.CpeDDORF14285P |
| 14290 | YhgE/Pip domain-containing protein | |||
| plasmid unnamed1 | ||||
| 14785 | 101 aa hypothetical protein | |||
| 14790 | M | M.CpeS10ORF15250P (99% identity) | M.CpeDDORF14790P | |
| 14795 | 57 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1950 | DUF4391 domain-containing protein | |||
| 1955 | M | M.CpeAV (97% identity) | VGACAT | M.CpeDDORF1955P |
| 1960 | R | Cpe83ORF4695P (94% identity) | VGACAT | CpeDDORF1955P |
| 1965 | 183 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4635 | 103 aa hypothetical protein | |||
| 4640 | R | CpeAMcrBP (99% identity) | CpeDDMcrBP | |
| 4645 | R | CpeAMcrCP (99% identity) | CpeDDMcrCP | |
| 4650 | SdpI family protein | |||