|
Putative Escherichia coli PK12 RM systems
Ref: Lopez-Dorta,Y. et al. unpublished
REBASE ref # 35036
Complete sequence: 5,005,235 bp
GenBank #: CP074031
REBASE acronym: EcoPK12
Org_num: 60946
All begin KFU67_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
20850 | N-6 DNA methylase | |||
20855 | R | EcosEC10ORF2260P (100% identity) | CCCNNNNNGTG | EcoPK12ORF20865P |
20860 | S | S.SflLIN11ORF19980P (100% identity) | CCCNNNNNGTG | S.EcoPK12ORF20865P |
20865 | M | M2.SflLIN11ORF19980P (99% identity) | CCCNNNNNGTG | M2.EcoPK12ORF20865P |
20870 | M | M1.EcosEC10ORF2260P (100% identity) | CCCNNNNNGTG | M1.EcoPK12ORF20865P |
20875 | toll/interleukin-1 receptor domain-containing | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
2175 | cell division protein DamX | |||
2180 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoPK12DamP |
2185 | ribulose-phosphate 3-epimerase | |||
2705 | DUF2556 family protein | |||
2710 | M | M.EspP079ORF3959P (100% identity) | ATGCAT | M.EcoPK12ORF2710P |
2715 | DNA-binding transcriptional regulator Fis | |||
7490 | recombination protein NinB | |||
7495 | M | M.EcoPK12ORF18945P (100% identity) | M.EcoPK12ORF7495P | |
7500 | NinE family protein | |||
14085 | drug/metabolite exporter YedA | |||
14090 | V | V.EcosEC10DcmP (100% identity) | V.EcoPK12DcmP | |
14095 | M | M.EcoWW2DcmP (100% identity) | CCWGG | M.EcoPK12DcmP |
14100 | phosphohydrolase | |||
18940 | NinE family protein | |||
18945 | M | M.EcoPK12ORF7495P (100% identity) | M.EcoPK12ORF18945P | |
18950 | recombination protein NinB | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
20650 | BrnT family toxin | |||
20655 | R | EcosEC10MrrP (100% identity) | EcoPK12MrrP | |
20660 | SAM-dependent DNA methyltransferase |