Escherichia coli MB19 |
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Putative Escherichia coli MB19 RM systems
Ref: Lopez-Dorta,Y. et al. unpublished
REBASE ref # 35036
| Sequence length: | GenBank #: | |
| Chromosome: | 4,774,884 bp | CP073981 |
| plasmid pYLMB19a: | 247,187 bp | CP073982 |
REBASE acronym: EcoMB19
Org_num: 60921
All begin KFU84_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5835 | M48 family metallopeptidase | |||
| 5840 | R | Kpn1401ORF4490P (98% identity) | EcoMB19ORF5860P | |
| 5845 | DUF262 domain-containing protein | |||
| 5850 | DUF262 domain-containing protein | |||
| 5855 | S | S.Mma102421ORF26020P (60% identity) | S.EcoMB19ORF5860P | |
| 5860 | M | M.Kpn1401ORF4490P (96% identity) | M.EcoMB19ORF5860P | |
| 5865 | transcription factor | |||
| 21610 | GTPase family protein | |||
| 21615 | M | M.Eco12C02ORF23545P (99% identity) | M.EcoMB19ORF21615P | |
| 21620 | S | S1.EcoS082ORF15350P (100% identity) | S.EcoMB19ORF21615P | |
| 21625 | R | EcoPSJ14ORF27630P (100% identity) | EcoMB19ORF21615P | |
| 21630 | IS5 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2785 | NinE family protein | |||
| 2790 | M | M.SflN97ORF15810P (100% identity) | GATC | M.EcoMB19ORF2790P |
| 2795 | recombination protein NinB | |||
| 9355 | cell division protein DamX | |||
| 9360 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoMB19DamP |
| 9365 | ribulose-phosphate 3-epimerase | |||
| 9980 | DUF2556 family protein | |||
| 9985 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.EcoMB19ORF9985P |
| 9990 | DNA-binding transcriptional regulator Fis | |||
| 16505 | phosphohydrolase | |||
| 16510 | M | M.SflN116DcmP (100% identity) | CCWGG | M.EcoMB19DcmP |
| 16515 | V | V.SflN116DcmP (100% identity) | CCWGG | V.EcoMB19DcmP |
| 16520 | drug/metabolite exporter YedA | |||
| 18470 | DUF977 family protein | |||
| ??? | M | M.Ecoi029ORF11125P (100% identity) | M.EcoMB19ORF18475P | |
| 18480 | 60 aa hypothetical protein | |||
| 20910 | phage holin, lambda family | |||
| 20915 | M | M.SflFF3ORF20115P (100% identity) | M.EcoMB19ORF20915P | |
| 20920 | 67 aa hypothetical protein | |||
| 20955 | LexA family transcriptional regulator | |||
| 20960 | M | M.Eco33C19ORF12815P (99% identity) | GATC | M.EcoMB19ORF20960P |
| 20965 | PerC family transcriptional regulator | |||
| 22800 | replication endonuclease | |||
| 22805 | M | M.EcoD72ORF14565P (100% identity) | GATC | M.EcoMB19ORF22805P |
| 22810 | TraR/DksA family transcriptional regulator | |||
| plasmid pYLMB19a | ||||
| 23650 | 55 aa hypothetical protein | |||
| 23655 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.EcoMB19ORF23655P |
| 23660 | thermonuclease family protein | |||
| 23705 | IS6-like element IS26 family transposase | |||
| 23710 | R | Eco592WORF48P (47% identity) | EcoMB19ORF23710P | |
| 23715 | WbuC family cupin fold metalloprotein | |||
| 24025 | 48 aa hypothetical protein | |||
| 24030 | M | M.YpsF1ORFBP (100% identity) | M.EcoMB19ORF24030P | |
| 24035 | 202 aa hypothetical protein | |||
| 24155 | DNA-binding protein | |||
| 24160 | M | M.YpsF1ORFDP (100% identity) | GATC | M.EcoMB19ORF24160P |
| 24165 | 284 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20740 | isocitrate dehydrogenase | |||
| 20745 | R | EcoHs3ORF10740P (100% identity) | YCGR | EcoMB19ORF20745P |
| 20750 | site-specific DNA recombinase | |||