Streptococcus suis DNC13 |
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Putative Streptococcus suis DNC13 RM systems
Ref: Fredriksen,S. unpublished
REBASE ref # 34885
Complete sequence: 2,264,071 bp
GenBank #: CP102149
REBASE acronym: SsuDNC13
Org_num: 61014
All begin NQZ89_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4120 | PspC domain-containing protein | |||
| 4125 | M | M.SsuDNS20ORF9075P (98% identity) | M.SsuDNC13ORF4125P | |
| 4130 | S | S3.SsuC2ORF2690P (41% identity) | S1.SsuDNC13ORF4125P | |
| 4135 | S | S2.SsuMA4ORFJP (99% identity) | S2.SsuDNC13ORF4125P | |
| 4140 | S | S3.SsuDNS20ORF9075P (69% identity) | S3.SsuDNC13ORF4125P | |
| 4145 | R | SsuS26ORF2370P (99% identity) | SsuDNC13ORF4125P | |
| 4150 | S | S4.SsuDNS20ORF9075P (98% identity) | S4.SsuDNC13ORF4125P | |
| 4155 | site-specific integrase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5 | replication initiator protein A | |||
| 10 | M | M.SdyC618ORFAP (99% identity) | M.SsuDNC13ORF10P | |
| 15 | 142 aa hypothetical protein | |||
| 2370 | 142 aa hypothetical protein | |||
| 2375 | M | M.SthP3AORF5335P (98% identity) | M.SsuDNC13ORF2375P | |
| 2380 | replication initiator protein A | |||
| 3485 | MmcQ/YjbR family DNA-binding protein | |||
| 3490 | R | Ssu2ORF2855P (97% identity) | SsuDNC13ORF3495P | |
| 3495 | M | M.Ssu1240ORFAP (97% identity) | M.SsuDNC13ORF3495P | |
| 3500 | 309 aa hypothetical protein | |||
| 7700 | 174 aa hypothetical protein | |||
| ??? | RM | SsuDNS20ORF5650P (99% identity) | SsuDNC13ORF7705P | |
| 7715 | heavy metal translocating P-type ATPase | |||
| 7885 | transposase | |||
| 7890 | M | M.SsuDNS20ORF5505P (99% identity) | M.SsuDNC13ORF7890P | |
| 7895 | RM | Ssp29887ORF1530P (95% identity) | SsuDNC13ORF7890P | |
| 7900 | 163 aa hypothetical protein | |||
| 10885 | 74 aa hypothetical protein | |||
| 10890 | M | M2.SsuTJ575ORFHP (98% identity) | M.SsuDNC13ORF10890P | |
| 10895 | DNA cytosine methyltransferase | |||
| 10890 | DNA (cytosine-5-)-methyltransferase | |||
| 10895 | M | M.SsuGX69ORF3500P (96% identity) | M.SsuDNC13ORF10895P | |
| 10900 | 150 aa hypothetical protein | |||
| 10915 | PBECR4 domain-containing protein | |||
| 10920 | RM | Ssp29887ORF5485P (78% identity) | SsuDNC13ORF10920P | |
| 10925 | 330 aa hypothetical protein | |||