Streptococcus suis M105052_S26 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Streptococcus suis M105052_S26 RM systems
Ref: Fredriksen,S. unpublished
REBASE ref # 34885
Complete sequence: 2,411,696 bp
GenBank #: CP102136
REBASE acronym: SsuS26
Org_num: 61023
All begin NQZ97_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2340 | site-specific integrase | |||
| 2345 | S | S2.SsuNLS40ORF8360P (99% identity) | S4.SsuS26ORF2370P | |
| 2350 | R | SspHN38ORFGP (99% identity) | SsuS26ORF2370P | |
| 2355 | S | S3.Ssu1112SORF9435P (66% identity) | S3.SsuS26ORF2370P | |
| 2360 | S | S2.SsuMA4ORFJP (99% identity) | S2.SsuS26ORF2370P | |
| 2365 | S | S3.SsuFJSM5ORF10335P (39% identity) | S1.SsuS26ORF2370P | |
| 2370 | M | M.SsuAKJ18ORF2360P (99% identity) | M.SsuS26ORF2370P | |
| 2375 | serine--tRNA ligase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2150 | DUF1266 domain-containing protein | |||
| 2155 | M | M2.SsuAKJ18ORF10075P (99% identity) | M1.SsuS26ORF2155P | |
| 2160 | M | M1.SsuAKJ18ORF10075P (100% identity) | M2.SsuS26ORF2155P | |
| 2165 | R | Ssu1112SORF9630P (99% identity) | SsuS26ORF2155P | |
| 2170 | DNA methyltransferase | |||
| 3375 | DNA cytosine methyltransferase | |||
| 3380 | M | M.SsuC2ORF3645P (100% identity) | M.SsuS26ORF3380P | |
| 3385 | 105 aa hypothetical protein | |||
| 3425 | 73 aa hypothetical protein | |||
| 3430 | M | M.SsuC2ORF9240P (100% identity) | M.SsuS26ORF3430P | |
| 3435 | single-stranded DNA-binding protein | |||
| 6260 | zinc-ribbon domain-containing protein | |||
| 6265 | M | M1.SsuYZDH1ORF6410P (100% identity) | M1.SsuS26ORF6265P | |
| 6270 | 81 aa hypothetical protein | |||
| 6275 | M | M2.SsuYZDH1ORF6410P (93% identity) | M2.SsuS26ORF6265P | |
| 6280 | 279 aa hypothetical protein | |||
| 6285 | R | Ssu48ORF6340P (99% identity) | SsuS26ORF6265P | |
| 6290 | C | C.Ssu48ORF6340P (100% identity) | C.SsuS26ORF6265P | |
| 6295 | DUF5677 domain-containing protein | |||
| 7320 | 118 aa hypothetical protein | |||
| 7325 | M | M.Ssu10237ORF856P (96% identity) | M.SsuS26ORF7325P | |
| 7330 | DUF1372 family protein | |||
| 9245 | MmcQ/YjbR family DNA-binding protein | |||
| 9250 | R | SsuMA4ORFIP (97% identity) | SsuS26ORF9255P | |
| 9255 | M | M.SsuLSS42ORF2345P (98% identity) | M1.SsuS26ORF9255P | |
| 9260 | 226 aa hypothetical protein | |||
| 9265 | 130 aa hypothetical protein | |||
| 9270 | 85 aa hypothetical protein | |||
| 9275 | ATP-binding protein | |||
| 9280 | M | M.Ssu12RC1ORF2355P (94% identity) | M2.SsuS26ORF9255P | |
| 9285 | cell filamentation protein Fic | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4325 | DUF4391 domain-containing protein | |||
| 4330 | M | M.Ssu48ORF4090P (85% identity) | M.SsuS26ORF4330P | |
| 4335 | 305 aa hypothetical protein | |||
| 4340 | R | SsuYZDH1ORF4185P (99% identity) | SsuS26ORF4330P | |
| 4345 | 249 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6325 | glutamine-hydrolyzing GMP synthase | |||
| 6330 | R | SsuC2McrCP (99% identity) | SsuS26McrCP | |
| 6335 | R | SsuC2McrBP (100% identity) | SsuS26McrBP | |
| 6340 | 262 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5620 | 69 aa hypothetical protein | |||
| 5625 | M | M.SsuYS77ORFKP (100% identity) | M.SsuS26ORF5625P | |
| 5630 | helix-turn-helix domain-containing protein | |||