Mycoplasma species 3686d |
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Putative Mycoplasma species 3686d RM systems
Ref: Spergser,J. unpublished
REBASE ref # 27781
Complete sequence: 969,795 bp
GenBank #: CP102082
REBASE acronym: Msp3686d
Org_num: 60978
All begin NPA12_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2810 | class I SAM-dependent methyltransferase | |||
| 2815 | S | S.Msp1578dORF2590P (98% identity) | S.Msp3686dORF2815P | |
| 2820 | M42 family metallopeptidase | |||
| 3720 | helix-turn-helix transcriptional regulator | |||
| 3725 | S | S1.Msp1578dORF3445P (65% identity) | S.Msp3686dORF3730P | |
| 3730 | M | M.Msp1578dORF3445P (100% identity) | M.Msp3686dORF3730P | |
| 3735 | R | Msp1578dORF3445P (65% identity) | Msp3686dORF3730P | |
| 3740 | phosphotransferase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1495 | 30S ribosome-binding factor RbfA | |||
| ??? | R | Msp1578dORF1530P (100% identity) | Msp3686dORF1505P | |
| 1505 | M | M.Msp1578dORF1530P (100% identity) | M.Msp3686dORF1505P | |
| 1510 | DUF6088 family protein | |||
| 1745 | DUF31 family protein | |||
| 1750 | M | M.Msp1578dORF1775P (100% identity) | M.Msp3686dORF1750P | |
| 1755 | RM | Msp1578dORF1775P (100% identity) | Msp3686dORF1750P | |
| 1760 | 217 aa hypothetical protein | |||
| 2580 | 304 aa hypothetical protein | |||
| 2585 | M | M.MciORF165P (33% identity) | M.Msp3686dORF2585P | |
| 2590 | R | MciORF165P (64% identity) | Msp3686dORF2585P | |
| 2595 | 282 aa hypothetical protein | |||
| 2625 | 206 aa hypothetical protein | |||
| 2630 | M | M.MciORF4420P (57% identity) | M.Msp3686dORF2630P | |
| 2635 | 319 aa hypothetical protein | |||
| 3135 | 141 aa hypothetical protein | |||
| 3140 | R | Msp1578dORF2850P (100% identity) | Msp3686dORF3145P | |
| 3145 | M | M.Msp1578dORF2850P (100% identity) | M.Msp3686dORF3145P | |
| 3160 | 194 aa hypothetical protein | |||
| 3165 | M | M.Msp1578dORF2870P (100% identity) | M.Msp3686dORF3165P | |
| 3170 | R | Msp1578dORF2870P (100% identity) | Msp3686dORF3165P | |
| 3175 | 122 aa hypothetical protein | |||
| 3585 | 686 aa hypothetical protein | |||
| 3590 | R | Msp1578dORF3305P (100% identity) | Msp3686dORF3595P | |
| 3595 | M | M.Msp1578dORF3305P (100% identity) | M.Msp3686dORF3595P | |
| 3600 | 23S rRNA (uracil(1939)-C(5))-methyltransferase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1190 | DNA gyrase subunit A | |||
| 1195 | R | Msp1578dORF1215P (100% identity) | Msp3686dORF1200P | |
| ??? | M | M1.Msp1578dORF1215P (93% identity) | M.Msp3686dORF1200P | |
| 1210 | DEAD/DEAH box helicase family protein | |||
| 1205 | type III restriction endonuclease subunit M | |||
| 1210 | R | Msp1578dORF1240P (99% identity) | Msp3686dORF1215P | |
| ??? | M | M.Msp1578dORF1240BP (73% identity) | M.Msp3686dORF1215P | |
| 1225 | 16S rRNA pseudouridine(516) synthase | |||
| 2030 | 834 aa hypothetical protein | |||
| 2035 | M | M.Msp1578dORF2055AP (78% identity) | M.Msp3686dORF2035P | |
| 2040 | R | Msp1578dORF2055P (99% identity) | Msp3686dORF2035P | |
| 2045 | 425 aa hypothetical protein | |||