Escherichia coli JSMCR1 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli JSMCR1 RM systems
Ref: Kim,J. et al. unpublished
REBASE ref # 34984
| Sequence length: | GenBank #: | |
| Chromosome: | 4,796,977 bp | CP030152 |
| plasmid pJSMCR1_2: | 134,064 bp | CP030154 |
| plasmid pJSMCR1_3: | 109,689 bp | CP030155 |
REBASE acronym: EcoCR1
Org_num: 60719
All begin JSMCR1_, JSMCR1_p
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1882 | 388 aa hypothetical protein | |||
| 1883 | M | M.EcoVEF10ORF18030P (100% identity) | M.EcoCR1ORF1883P | |
| 1884 | S | S.EcoR10I (62% identity) | S.EcoCR1ORF1883P | |
| 1885 | 206 aa hypothetical protein | |||
| 1886 | 594 aa hypothetical protein | |||
| 1887 | R | EcoLR171ORF18030P (99% identity) | EcoCR1ORF1883P | |
| 1888 | metal-dependent hydrolase | |||
| 3957 | Mrr restriction system protein | |||
| 3958 | R | EcosS142ORF37770P (100% identity) | CACNNNNNNGTTG | EcoCR1ORF3959P |
| 3959 | M | M.EcosS142ORF37770P (99% identity) | CACNNNNNNGTTG | M.EcoCR1ORF3959P |
| ??? | S | S.EcosS142ORF37770P (100% identity) | CACNNNNNNGTTG | S.EcoCR1ORF3959P |
| 3961 | 113 aa hypothetical protein | |||
| 4155 | Mobile element protein | |||
| 4156 | S | S.SflN101ORF19075P (100% identity) | GAACNNNNNTGC | S.EcoCR1ORF4157P |
| 4157 | M | M.Sen6640ORF2690P (100% identity) | GAACNNNNNTGC | M.EcoCR1ORF4157P |
| 4158 | R | EmaC12ORF18910P (100% identity) | GAACNNNNNTGC | EcoCR1ORF4157P |
| 4159 | transposase | |||
| plasmid pJSMCR1_2 | ||||
| 296 | 55 aa hypothetical protein | |||
| 297 | R | EcoRA119ORF26420P (100% identity) | CCANNNNNNNRTAYG | EcoCR1ORF299P |
| 298 | S | S.EcoPK8277ORF23015P (100% identity) | CCANNNNNNNRTAYG | S.EcoCR1ORF299P |
| 299 | M | M.EcoPSS10ORF26960P (100% identity) | CCANNNNNNNRTAYG | M.EcoCR1ORF299P |
| 300 | Prevent host death protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 362 | DamX inner membrane protein | |||
| 363 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoCR1DamP |
| 364 | Ribulose-phosphate 3-epimerase | |||
| 481 | 59 aa hypothetical protein | |||
| 482 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcoCR1ORF482P |
| 483 | DNA-binding protein Fis | |||
| 1815 | metal-dependent phosphohydrolase | |||
| 1816 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.EcoCR1DcmP |
| 1817 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcoCR1DcmP |
| 1818 | Permease of the drug/metabolite transporter | |||
| 3055 | Phage replication protein | |||
| 3056 | M | M.Ecop10BORF14750P (100% identity) | GATC | M.EcoCR1ORF3056P |
| 3057 | Phage protein | |||
| 4003 | 40 aa hypothetical protein | |||
| 4004 | R | EcosB2CORFAP (100% identity) | EcoCR1ORF4004P | |
| 4005 | 134 aa hypothetical protein | |||
| plasmid pJSMCR1_3 | ||||
| 466 | cytoplasmic protein | |||
| 467 | M | M.Sen72779ORF22555P (100% identity) | M.EcoCR1ORF467P | |
| 468 | 41 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3956 | GTPase | |||
| 3957 | R | SenHNK130MrrP (100% identity) | EcoCR1MrrP | |
| 3958 | Type I restriction-modification system, | |||