Escherichia coli 035152 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli 035152 RM systems
Ref: Ma,K. et al. unpublished
REBASE ref # 34982
| Sequence length: | GenBank #: | |
| Chromosome: | 4,863,139 bp | CP101705 |
| plasmid pOXA1041_035152: | 223,341 bp | CP101706 |
REBASE acronym: Eco35152
Org_num: 60712
All begin NPL72_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4320 | transposase | |||
| 4325 | R | SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | Eco35152ORF4330P |
| 4330 | M | M.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | M.Eco35152ORF4330P |
| 4335 | S | S.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | S.Eco35152ORF4330P |
| 4340 | AAA family ATPase | |||
| 6140 | IS1 family transposase | |||
| 6145 | R | Sen12509ORF5865P (100% identity) | ACAYNNNNCTG | Eco35152ORF6155P |
| 6150 | S | S.Sen12509ORF5865P (100% identity) | ACAYNNNNCTG | S.Eco35152ORF6155P |
| 6155 | M | M.SenS688ORF13495P (100% identity) | ACAYNNNNCTG | M.Eco35152ORF6155P |
| 6160 | integrase core domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1955 | cell division protein DamX | |||
| 1960 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco35152DamP |
| 1965 | ribulose-phosphate 3-epimerase | |||
| 2570 | DUF2556 family protein | |||
| 2575 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.Eco35152ORF2575P |
| 2580 | DNA-binding transcriptional regulator Fis | |||
| 9695 | phosphohydrolase | |||
| 9700 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.Eco35152DcmP |
| 9705 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.Eco35152DcmP |
| 9710 | drug/metabolite exporter YedA | |||
| 21715 | LexA family transcriptional regulator | |||
| 21720 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco35152ORF21720P |
| 21725 | PerC family transcriptional regulator | |||
| plasmid pOXA1041_035152 | ||||
| 23990 | SOS response-associated peptidase family | |||
| 23995 | M | M.CfrS1ORF23225P (100% identity) | M.Eco35152ORF23995P | |
| 24000 | 73 aa hypothetical protein | |||
| 24775 | 73 aa hypothetical protein | |||
| 24780 | M | M.Eco22004ORF24750P (100% identity) | M.Eco35152ORF24780P | |
| 24785 | 103 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 15250 | replication endonuclease | |||
| 15255 | M | M.Sen663ORF16605P (100% identity) | GATC | M.Eco35152ORF15255P |
| 15260 | TraR/DksA family transcriptional regulator | |||