Escherichia coli 2003-3014 |
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Putative Escherichia coli 2003-3014 RM systems
Ref: Kalalah,A. and Eppinger,M. unpublished
REBASE ref # 33364
| Sequence length: | GenBank #: | |
| Chromosome: | 5,840,137 bp | CP101292 |
| plasmid pO26-1: | 90,123 bp | CP101295 |
| plasmid pO26-2: | 6,741 bp | CP101296 |
REBASE acronym: Eco3014
Org_num: 60378
All begin NMK58_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3420 | endoribonuclease SymE | |||
| 3425 | S | S.EcoSTEC508ORF24455P (100% identity) | TACNNNNNNNRTRTC | S.Eco3014ORF3430P |
| 3430 | M | M.EcoSTEC508ORF24455P (100% identity) | TACNNNNNNNRTRTC | M.Eco3014ORF3430P |
| 3435 | R | EcosLF82ORF3455P (100% identity) | TACNNNNNNNRTRTC | Eco3014ORF3430P |
| 3440 | 322 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11515 | DUF1382 family protein | |||
| 11520 | M | M.Esp10290ORF1290P (100% identity) | GATC | M.Eco3014ORF11520P |
| 11525 | regulator | |||
| 11605 | Rha family transcriptional regulator | |||
| 11610 | R | Sso1099IP (100% identity) | CTGCAG | Eco3014ORF11615P |
| 11615 | M | M.Sso1099I (100% identity) | CTGCAG | M.Eco3014ORF11615P |
| 11620 | LexA family transcriptional regulator | |||
| 13045 | TrmB family transcriptional regulator | |||
| 13050 | M | M.EcoMBT5ORF5965P (100% identity) | M.Eco3014ORF13050P | |
| 13065 | DUF3927 family protein | |||
| 18570 | drug/metabolite exporter YedA | |||
| 18575 | V | V.SflSTLE3DcmP (100% identity) | CCWGG | V.Eco3014DcmP |
| 18580 | M | M.SflSTLE3DcmP (100% identity) | CCWGG | M.Eco3014DcmP |
| 18585 | HD domain-containing protein | |||
| 20650 | 599 aa hypothetical protein | |||
| ??? | M | M.EcoSTEC416ORF20240P (100% identity) | GATC | M.Eco3014ORF20655P |
| 20665 | recombination protein NinB | |||
| 21475 | Com family DNA-binding transcriptional | |||
| 21480 | M | M.Eco7SOC04ORF7470P (100% identity) | M.Eco3014ORF21480P | |
| 21485 | flagella biosynthesis regulator Flk | |||
| 23670 | LexA family transcriptional regulator | |||
| 23675 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco3014ORF23675P |
| 23680 | PerC family transcriptional regulator | |||
| 27215 | DNA-binding transcriptional regulator Fis | |||
| 27220 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco3014ORF27220P |
| 27225 | DUF2556 family protein | |||
| plasmid pO26-1 | ||||
| 30280 | 103 aa hypothetical protein | |||
| 30285 | M | M.EcopO26ORF185P (100% identity) | SAY | M.Eco3014ORF30285P |
| 30290 | 72 aa hypothetical protein | |||
| plasmid pO26-2 | ||||
| 30460 | M | M.Sen64991ORFAP (100% identity) | GRCGYC | M.Eco3014ORF30460P |
| 30465 | R | Sen64991ORFAP (100% identity) | GRCGYC | Eco3014ORF30460P |
| 30470 | 127 aa hypothetical protein | |||