Escherichia coli EC21Z-101 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli EC21Z-101 RM systems
Ref: Ma,J. et al. unpublished
REBASE ref # 34908
| Sequence length: | GenBank #: | |
| Chromosome: | 4,683,571 bp | CP101240 |
| plasmid pEC21Z101-80K: | 80,388 bp | CP101242 |
| plasmid pEC21Z101-85K: | 85,310 bp | CP101241 |
REBASE acronym: EcoZ101
Org_num: 60388
All begin NML23_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5590 | IS1 family transposase | |||
| 5595 | R | Sen12509ORF5865P (100% identity) | ACAYNNNNCTG | EcoZ101ORF5605P |
| 5600 | S | S.Sen12509ORF5865P (100% identity) | ACAYNNNNCTG | S.EcoZ101ORF5605P |
| 5605 | M | M.SenS688ORF13495P (100% identity) | ACAYNNNNCTG | M.EcoZ101ORF5605P |
| 5610 | integrase core domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2430 | DUF2556 family protein | |||
| 2435 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.EcoZ101ORF2435P |
| 2440 | DNA-binding transcriptional regulator Fis | |||
| 8790 | phosphohydrolase | |||
| 8795 | M | M.EcosEC5DcmP (100% identity) | CCWGG | M.EcoZ101DcmP |
| 8800 | V | V.EcosEC7DcmP (100% identity) | CCWGG | V.EcoZ101DcmP |
| 8805 | drug/metabolite exporter YedA | |||
| 12265 | 39 aa hypothetical protein | |||
| 12285 | M | M.EcoZ097ORF12290P (100% identity) | A | M.EcoZ101ORF12285P |
| 12290 | TrmB family transcriptional regulator | |||
| 17585 | phage lysis protein EssD | |||
| 17590 | M | M.Sso63633ORF22290P (100% identity) | M.EcoZ101ORF17590P | |
| 17595 | TrmB family transcriptional regulator | |||
| 17630 | LexA family transcriptional regulator | |||
| 17635 | M | M.EcoZ1836ORF22690P (100% identity) | GATC | M.EcoZ101ORF17635P |
| 17640 | PerC family transcriptional regulator | |||
| plasmid pEC21Z101-80K | ||||
| 23610 | TerB family tellurite resistance protein | |||
| 23625 | M | M.EcoZ097ORF24385P (100% identity) | M.EcoZ101ORF23625P | |
| 23630 | recombination-associated protein RdgC | |||
| plasmid pEC21Z101-85K | ||||
| 22815 | 103 aa hypothetical protein | |||
| 22820 | M | M.Sso2ORF26005P (100% identity) | M.EcoZ101ORF22820P | |
| 22825 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12945 | isocitrate/isopropylmalate family dehydrogenase | |||
| 12950 | R | EmaE2C08McrCP (100% identity) | EcoZ101McrCP | |
| 12955 | R | EcoteDMcrBP (100% identity) | EcoZ101McrBP | |
| 12960 | recombinase family protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14520 | replication endonuclease | |||
| 14525 | M | M.Sen663ORF16605P (100% identity) | GATC | M.EcoZ101ORF14525P |
| 14530 | TraR/DksA family transcriptional regulator | |||