Escherichia coli EC21Z-097 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli EC21Z-097 RM systems
Ref: Ma,J. et al. unpublished
REBASE ref # 34908
| Sequence length: | GenBank #: | |
| Chromosome: | 4,683,814 bp | CP101245 |
| plasmid pEC21Z097-80K: | 80,388 bp | CP101248 |
| plasmid pEC21Z097-85K: | 85,299 bp | CP101247 |
REBASE acronym: EcoZ097
Org_num: 60387
All begin NML22_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5590 | IS1 family transposase | |||
| 5595 | R | Sen12509ORF5865P (100% identity) | ACAYNNNNCTG | EcoZ097ORF5605P |
| 5600 | S | S.Sen12509ORF5865P (100% identity) | ACAYNNNNCTG | S.EcoZ097ORF5605P |
| 5605 | M | M.SenS688ORF13495P (100% identity) | ACAYNNNNCTG | M.EcoZ097ORF5605P |
| 5610 | integrase core domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2430 | DUF2556 family protein | |||
| 2435 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.EcoZ097ORF2435P |
| 2440 | DNA-binding transcriptional regulator Fis | |||
| 8795 | phosphohydrolase | |||
| 8800 | M | M.EcosEC5DcmP (100% identity) | CCWGG | M.EcoZ097DcmP |
| 8805 | V | V.EcosEC7DcmP (100% identity) | CCWGG | V.EcoZ097DcmP |
| 8810 | drug/metabolite exporter YedA | |||
| 12270 | 39 aa hypothetical protein | |||
| 12290 | M | M.EcoZ101ORF12285P (100% identity) | A | M.EcoZ097ORF12290P |
| 12295 | TrmB family transcriptional regulator | |||
| 17595 | phage lysis protein EssD | |||
| 17600 | M | M.Sso63633ORF22290P (100% identity) | M.EcoZ097ORF17600P | |
| 17605 | TrmB family transcriptional regulator | |||
| 17640 | LexA family transcriptional regulator | |||
| 17645 | M | M.EcoZ1836ORF22690P (100% identity) | GATC | M.EcoZ097ORF17645P |
| 17650 | PerC family transcriptional regulator | |||
| plasmid pEC21Z097-80K | ||||
| 24370 | TerB family tellurite resistance protein | |||
| 24385 | M | M.EcoZ101ORF23625P (100% identity) | M.EcoZ097ORF24385P | |
| 24390 | recombination-associated protein RdgC | |||
| plasmid pEC21Z097-85K | ||||
| 23580 | 103 aa hypothetical protein | |||
| 23585 | M | M.Sso2ORF26005P (100% identity) | M.EcoZ097ORF23585P | |
| 23590 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12950 | isocitrate/isopropylmalate family dehydrogenase | |||
| 12955 | R | EmaE2C08McrCP (100% identity) | EcoZ097McrCP | |
| 12960 | R | EcoteDMcrBP (100% identity) | EcoZ097McrBP | |
| 12965 | recombinase family protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14525 | replication endonuclease | |||
| 14530 | M | M.Sen663ORF16605P (100% identity) | GATC | M.EcoZ097ORF14530P |
| 14535 | TraR/DksA family transcriptional regulator | |||