Escherichia coli EC21Z-083 |
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Putative Escherichia coli EC21Z-083 RM systems
Ref: Ma,J. et al. unpublished
REBASE ref # 34908
| Sequence length: | GenBank #: | |
| Chromosome: | 4,683,692 bp | CP101251 |
| plasmid pEC21Z083-80K: | 80,388 bp | CP101254 |
| plasmid pEC21Z083-85K: | 85,299 bp | CP101253 |
REBASE acronym: EcoZ083
Org_num: 60386
All begin NML21_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5600 | IS1 family transposase | |||
| 5605 | R | Sen12509ORF5865P (100% identity) | ACAYNNNNCTG | EcoZ083ORF5615P |
| 5610 | S | S.Sen12509ORF5865P (100% identity) | ACAYNNNNCTG | S.EcoZ083ORF5615P |
| 5615 | M | M.SenS688ORF13495P (100% identity) | ACAYNNNNCTG | M.EcoZ083ORF5615P |
| 5620 | integrase core domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2440 | DUF2556 family protein | |||
| 2445 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.EcoZ083ORF2445P |
| 2450 | DNA-binding transcriptional regulator Fis | |||
| 8810 | phosphohydrolase | |||
| 8815 | M | M.EcosEC5DcmP (100% identity) | CCWGG | M.EcoZ083DcmP |
| 8820 | V | V.EcosEC7DcmP (100% identity) | CCWGG | V.EcoZ083DcmP |
| 8825 | drug/metabolite exporter YedA | |||
| 12295 | 39 aa hypothetical protein | |||
| 12315 | M | M.EcoZ101ORF12285P (100% identity) | A | M.EcoZ083ORF12315P |
| 12320 | TrmB family transcriptional regulator | |||
| 17630 | phage lysis protein EssD | |||
| 17635 | M | M.Sso63633ORF22290P (100% identity) | M.EcoZ083ORF17635P | |
| 17640 | TrmB family transcriptional regulator | |||
| 17675 | LexA family transcriptional regulator | |||
| 17680 | M | M.EcoZ1836ORF22690P (100% identity) | GATC | M.EcoZ083ORF17680P |
| 17685 | PerC family transcriptional regulator | |||
| plasmid pEC21Z083-80K | ||||
| 24425 | TerB family tellurite resistance protein | |||
| 24440 | M | M.EcoZ101ORF23625P (100% identity) | M.EcoZ083ORF24440P | |
| 24445 | recombination-associated protein RdgC | |||
| plasmid pEC21Z083-85K | ||||
| 23620 | 103 aa hypothetical protein | |||
| 23625 | M | M.Sso2ORF26005P (100% identity) | M.EcoZ083ORF23625P | |
| 23630 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12975 | isocitrate/isopropylmalate family dehydrogenase | |||
| 12980 | R | EcosEC27McrCP (100% identity) | EcoZ083McrCP | |
| 12985 | R | EcoteDMcrBP (100% identity) | EcoZ083McrBP | |
| 12990 | recombinase family protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14555 | replication endonuclease | |||
| 14560 | M | M.Sen663ORF16605P (100% identity) | GATC | M.EcoZ083ORF14560P |
| 14565 | TraR/DksA family transcriptional regulator | |||