Salmonella enterica subsp. enterica serovar Typhimurium 013+ |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar Typhimurium 013+ RM systems
Ref: Wang,S. et al. unpublished
REBASE ref # 34933
Complete sequence: 4,913,592 bp
GenBank #: CP099705
REBASE acronym: Sen013
Org_num: 60505
All begin NG892_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 20080 | restriction endonuclease | |||
| 20085 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen013ORF20090P |
| 20090 | M | M.StyUK1II (100% identity) | GAGNNNNNNRTAYG | M.Sen013ORF20090P |
| 20095 | S | S.SspA39ORFBP (100% identity) | GAGNNNNNNRTAYG | S.Sen013ORF20090P |
| 20100 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1810 | cell division protein DamX | |||
| 1815 | M | M.StyTDamP (100% identity) | GATC | M.Sen013DamP |
| 1820 | ribulose-phosphate 3-epimerase | |||
| 2305 | DUF2556 family protein | |||
| 2310 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen013ORF2310P |
| 2315 | DNA-binding transcriptional regulator Fis | |||
| 9480 | PerC family transcriptional regulator | |||
| 9485 | M | M.StyUK1V (100% identity) | GATC | M.Sen013ORF9485P |
| 9490 | RusA family crossover junction | |||
| 20240 | BREX system P-loop protein BrxC | |||
| 20245 | RM | StyUK1IV (100% identity) | GATCAG | Sen013ORF20245P |
| 20250 | AAA family ATPase | |||
| 21710 | RusA family crossover junction | |||
| 21715 | M | M.Sens013ORF21535P (100% identity) | GATC | M.Sen013ORF21715P |
| 21720 | PerC family transcriptional regulator | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17895 | small effector SsaA | |||
| 17900 | R | StyUK1IP (99% identity) | CAGAG | Sen013ORF17905P |
| 17905 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen013ORF17905P |
| 17910 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20075 | BrnT family toxin | |||
| 20080 | R | StyUK1MrrP (100% identity) | Sen013MrrP | |
| 20085 | type I restriction-modification system | |||