Salmonella enterica subsp. enterica serovar Typhimurium R18.1932 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium R18.1932 RM systems
Ref: Chiou,C.S. et al. unpublished
REBASE ref # 34932
| Sequence length: | GenBank #: | |
| Chromosome: | 4,790,068 bp | CP100732 |
| plasmid pR18.1932_161k: | 161,012 bp | CP100733 |
| plasmid pR18.1932_88k: | 87,844 bp | CP100734 |
REBASE acronym: Sen1932
Org_num: 60510
All begin NL737_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19730 | restriction endonuclease | |||
| 19735 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen1932ORF19740P |
| 19740 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen1932ORF19740P |
| 19745 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen1932ORF19740P |
| 19750 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1815 | cell division protein DamX | |||
| 1820 | M | M.StyTDamP (100% identity) | GATC | M.Sen1932DamP |
| 1825 | ribulose-phosphate 3-epimerase | |||
| 2310 | DUF2556 family protein | |||
| 2315 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen1932ORF2315P |
| 2320 | DNA-binding transcriptional regulator Fis | |||
| 19890 | BREX system P-loop protein BrxC | |||
| 19895 | RM | StyUK1IV (100% identity) | GATCAG | Sen1932ORF19895P |
| 19900 | AAA family ATPase | |||
| plasmid pR18.1932_161k | ||||
| 23965 | 100 aa hypothetical protein | |||
| 23970 | M | M.YrupYR1ORFCP (100% identity) | CCNGG | M.Sen1932ORF23970P |
| 23975 | 143 aa hypothetical protein | |||
| plasmid pR18.1932_88k | ||||
| 24285 | 103 aa hypothetical protein | |||
| 24290 | M | M.SspPIBORF23080P (100% identity) | M.Sen1932ORF24290P | |
| 24295 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5670 | GTPase family protein | |||
| 5675 | M | M.SenXSKORFDP (100% identity) | CACCGT | M.Sen1932ORF5675P |
| 5680 | R | SenXSKORFDP (100% identity) | CACCGT | Sen1932ORF5675P |
| 5685 | inovirus Gp2 family protein | |||
| 17190 | small effector SsaA | |||
| 17195 | R | StyUK1IP (99% identity) | CAGAG | Sen1932ORF17200P |
| 17200 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen1932ORF17200P |
| 17205 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19725 | BrnT family toxin | |||
| 19730 | R | StyUK1MrrP (100% identity) | Sen1932MrrP | |
| 19735 | type I restriction-modification system | |||