Salmonella enterica subsp. enterica serovar Mbandaka R17.4855 |
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Putative Salmonella enterica subsp. enterica serovar Mbandaka R17.4855 RM systems
Ref: Chiou,C.S. et al. unpublished
REBASE ref # 34932
| Sequence length: | GenBank #: | |
| Chromosome: | 4,750,785 bp | CP100722 |
| plasmid pR17.4855_328k: | 328,074 bp | CP100723 |
REBASE acronym: Sen4855
Org_num: 60500
All begin NL738_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19320 | 322 aa hypothetical protein | |||
| 19325 | R | SenXB08ORF19780P (100% identity) | CACNNNNNNNRTRTC | Sen4855ORF19330P |
| 19330 | M | M.SenXB08ORF19780P (100% identity) | CACNNNNNNNRTRTC | M.Sen4855ORF19330P |
| 19335 | S | S.SenXB08ORF19780P (100% identity) | CACNNNNNNNRTRTC | S.Sen4855ORF19330P |
| 19340 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1725 | cell division protein DamX | |||
| 1730 | M | M.StyTDamP (100% identity) | GATC | M.Sen4855DamP |
| 1735 | ribulose-phosphate 3-epimerase | |||
| 3130 | DUF2732 domain-containing protein | |||
| 3135 | M | M.SensSZL38ORF19965P (100% identity) | GATC | M.Sen4855ORF3135P |
| 3140 | replication endonuclease | |||
| 5580 | zinc ribbon domain-containing protein | |||
| 5585 | M | M.SenXB08ORF5455P (100% identity) | GGTACC | M.Sen4855ORF5585P |
| 5590 | 470 aa hypothetical protein | |||
| 9245 | phosphohydrolase | |||
| 9250 | M | M.SenXB08DcmP (100% identity) | CCWGG | M.Sen4855DcmP |
| 9255 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.Sen4855DcmP |
| 9260 | drug/metabolite exporter YedA | |||
| 19465 | IS3 family transposase | |||
| 19470 | M | M.SenXB08ORF19920P (100% identity) | RCCGGY | M.Sen4855ORF19470P |
| 19475 | R | SenXB08ORF19920P (100% identity) | RCCGGY | Sen4855ORF19470P |
| 19480 | response regulator receiver domain | |||
| 19480 | response regulator receiver domain | |||
| 19485 | R | SenXB08ORF19940P (100% identity) | Sen4855ORF19485P | |
| 19490 | 97 aa hypothetical protein | |||
| plasmid pR17.4855_328k | ||||
| 23825 | 55 aa hypothetical protein | |||
| 23830 | M | M.SenZC055ORF26240P (100% identity) | CCWGG | M.Sen4855ORF23830P |
| 23835 | thermonuclease family protein | |||
| 24385 | 102 aa hypothetical protein | |||
| 24390 | M | M.SenF8025ORFAP (86% identity) | M.Sen4855ORF24390P | |
| 24395 | 203 aa hypothetical protein | |||
| 24715 | DNA-binding protein | |||
| 24720 | M | M.SenZC055ORF25270P (100% identity) | M.Sen4855ORF24720P | |
| 24725 | 273 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17020 | small effector SsaA | |||
| 17025 | R | SspA292ORF17210P (100% identity) | CAGAG | Sen4855ORF17030P |
| 17030 | M | M.SenXB08ORF17480P (100% identity) | CAGAG | M.Sen4855ORF17030P |
| 17035 | MFS transporter | |||