Salmonella enterica subsp. enterica serovar Thompson R18.0872 |
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Putative Salmonella enterica subsp. enterica serovar Thompson R18.0872 RM systems
Ref: Chiou,C.S. et al. unpublished
REBASE ref # 34932
| Sequence length: | GenBank #: | |
| Chromosome: | 4,764,385 bp | CP100702 |
| plasmid pR18.0872_93k: | 93,173 bp | CP100704 |
REBASE acronym: Sen0872
Org_num: 60504
All begin NL734_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19840 | 322 aa hypothetical protein | |||
| 19845 | R | Spy5740IP (100% identity) | AGANNNNNNNNCTGG | Sen0872ORF19850P |
| 19850 | M | M.Spy5740I (100% identity) | AGANNNNNNNNCTGG | M.Sen0872ORF19850P |
| 19855 | S | S.Spy5740I (100% identity) | AGANNNNNNNNCTGG | S.Sen0872ORF19850P |
| 19860 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1800 | cell division protein DamX | |||
| 1805 | M | M.StyTDamP (100% identity) | GATC | M.Sen0872DamP |
| 1810 | ribulose-phosphate 3-epimerase | |||
| 2290 | DUF2556 family protein | |||
| 2295 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen0872ORF2295P |
| 2300 | DNA-binding transcriptional regulator Fis | |||
| 9025 | phosphohydrolase | |||
| 9030 | M | M.SspZ54DcmP (100% identity) | CCWGG | M.Sen0872DcmP |
| 9035 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.Sen0872DcmP |
| 9040 | drug/metabolite exporter YedA | |||
| 19980 | YebC/PmpR family DNA-binding transcriptional | |||
| 19985 | R | SensS639ORF19755P (100% identity) | Sen0872ORF19985P | |
| 19990 | sce7725 family protein | |||
| plasmid pR18.0872_93k | ||||
| 24255 | 103 aa hypothetical protein | |||
| 24260 | M | M.SflN101ORF24625P (100% identity) | M.Sen0872ORF24260P | |
| 24265 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17505 | small effector SsaA | |||
| 17510 | R | Ssp15303ORFGP (99% identity) | CAGAG | Sen0872ORF17515P |
| 17515 | M | M.Spy5740II (100% identity) | CAGAG | M.Sen0872ORF17515P |
| 17520 | MFS transporter | |||