Salmonella enterica subsp. enterica serovar Newport R18.0287 |
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Putative Salmonella enterica subsp. enterica serovar Newport R18.0287 RM systems
Ref: Chiou,C.S. et al. unpublished
REBASE ref # 34932
| Sequence length: | GenBank #: | |
| Chromosome: | 4,745,939 bp | CP100689 |
| plasmid pR18.0287_259k: | 258,970 bp | CP100690 |
REBASE acronym: Sen0287
Org_num: 60503
All begin FGU70_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4780 | 490 aa hypothetical protein | |||
| 4785 | M | M.SliFG3ORFAP (88% identity) | M.Sen0287ORF4785P | |
| 4790 | S | S.Vsp12BORF8150P (49% identity) | S.Sen0287ORF4785P | |
| 4795 | 78 aa hypothetical protein | |||
| 19510 | 322 aa hypothetical protein | |||
| 19515 | R | Sen0234ORF19465P (100% identity) | GACNNNNNNNRTCC | Sen0287ORF19520P |
| 19520 | M | M.SenS3ORF11567P (100% identity) | GACNNNNNNNRTCC | M.Sen0287ORF19520P |
| 19525 | S | S.SenS3ORF11567P (100% identity) | GACNNNNNNNRTCC | S.Sen0287ORF19520P |
| 19530 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1745 | cell division protein DamX | |||
| 1750 | M | M.StyTDamP (100% identity) | GATC | M.Sen0287DamP |
| 1755 | ribulose-phosphate 3-epimerase | |||
| 5540 | helix-turn-helix domain-containing protein | |||
| 5545 | M | M.SenWT281ORF6055P (100% identity) | M.Sen0287ORF5545P | |
| 5550 | AAA family ATPase | |||
| 5595 | PerC family transcriptional regulator | |||
| 5600 | M | M.Sen0234ORF5620P (100% identity) | M.Sen0287ORF5600P | |
| 5605 | RusA family crossover junction | |||
| 9130 | phosphohydrolase | |||
| 9135 | M | M.SenLiv11DcmP (100% identity) | CCWGG | M.Sen0287DcmP |
| 9140 | V | V.SenS50DcmP (100% identity) | V.Sen0287DcmP | |
| 9145 | drug/metabolite exporter YedA | |||
| 19650 | YebC/PmpR family DNA-binding transcriptional | |||
| 19655 | R | SenZYXORFBP (100% identity) | Sen0287ORF19655P | |
| 19660 | sce7725 family protein | |||
| plasmid pR18.0287_259k | ||||
| 23600 | 55 aa hypothetical protein | |||
| 23605 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.Sen0287ORF23605P |
| 23610 | thermonuclease family protein | |||
| 23705 | IS1 family transposase | |||
| 23710 | M | M.Ubap201ORF4P (100% identity) | CCWGG | M.Sen0287ORF23710P |
| 23715 | R | Ssp3CORF24390P (100% identity) | CCWGG | Sen0287ORF23710P |
| 23720 | recombinase family protein | |||
| 24130 | 48 aa hypothetical protein | |||
| 24135 | M | M.YpsF1ORFBP (100% identity) | M.Sen0287ORF24135P | |
| 24140 | 202 aa hypothetical protein | |||
| 24270 | DNA-binding protein | |||
| 24275 | M | M.YpsF1ORFDP (100% identity) | GATC | M.Sen0287ORF24275P |
| 24280 | 277 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17320 | small effector SsaA | |||
| 17325 | R | Ssp6947IIP (100% identity) | CAGAG | Sen0287ORF17330P |
| 17330 | M | M.SenZYXORFDP (100% identity) | CAGAG | M.Sen0287ORF17330P |
| 17335 | MFS transporter | |||