Salmonella enterica subsp. enterica serovar Typhimurium R17.3867 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium R17.3867 RM systems
Ref: Chiou,C.S. et al. unpublished
REBASE ref # 34932
Complete sequence: 4,977,701 bp
GenBank #: CP100691
REBASE acronym: Sen73867
Org_num: 60506
All begin NL690_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 20535 | restriction endonuclease | |||
| 20540 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen73867ORF20545P |
| 20545 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen73867ORF20545P |
| 20550 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen73867ORF20545P |
| 20555 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 640 | IS6-like element IS26 family transposase | |||
| 645 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.Sen73867ORF645P |
| 650 | 55 aa hypothetical protein | |||
| 2225 | cell division protein DamX | |||
| 2230 | M | M.StyTDamP (100% identity) | GATC | M.Sen73867DamP |
| 2235 | ribulose-phosphate 3-epimerase | |||
| 2720 | DUF2556 family protein | |||
| 2725 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen73867ORF2725P |
| 2730 | DNA-binding transcriptional regulator Fis | |||
| 6070 | TraR/DksA family transcriptional regulator | |||
| 6075 | M | M.Ssp15303ORFCP (88% identity) | M.Sen73867ORF6075P | |
| 6080 | replication endonuclease | |||
| 10130 | phosphohydrolase | |||
| 10135 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen73867DcmP |
| 10140 | V | V.Ssp15303Dcm2P (100% identity) | V.Sen73867DcmP | |
| 10145 | drug/metabolite exporter YedA | |||
| 20700 | BREX system P-loop protein BrxC | |||
| 20705 | RM | StyUK1IV (100% identity) | GATCAG | Sen73867ORF20705P |
| 20710 | AAA family ATPase | |||
| 22195 | LexA family transcriptional regulator | |||
| 22200 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Sen73867ORF22200P |
| 22205 | 28 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 18370 | small effector SsaA | |||
| 18375 | R | Ssp15303ORFGP (99% identity) | CAGAG | Sen73867ORF18380P |
| 18380 | M | M.Ssp15303ORFGP (100% identity) | CAGAG | M.Sen73867ORF18380P |
| 18385 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20530 | BrnT family toxin | |||
| 20535 | R | StyUK1MrrP (100% identity) | Sen73867MrrP | |
| 20540 | type I restriction-modification system | |||