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Putative Salmonella enterica subsp. enterica serovar Typhimurium R18.0292 RM systems
Ref: Chiou,C.S. et al. unpublished
REBASE ref # 34932
Sequence length: | GenBank #: | |
Chromosome: | 4,790,069 bp | CP100739 |
plasmid pR18.0292_200k: | 199,721 bp | CP100740 |
plasmid pR18.0292_89k: | 88,662 bp | CP100741 |
REBASE acronym: Sen0292
Org_num: 60508
All begin NL736_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
19735 | restriction endonuclease | |||
19740 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen0292ORF19745P |
19745 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen0292ORF19745P |
19750 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen0292ORF19745P |
19755 | endoribonuclease SymE | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
1815 | cell division protein DamX | |||
1820 | M | M.StyTDamP (100% identity) | GATC | M.Sen0292DamP |
1825 | ribulose-phosphate 3-epimerase | |||
2310 | DUF2556 family protein | |||
2315 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen0292ORF2315P |
2320 | DNA-binding transcriptional regulator Fis | |||
19895 | BREX system P-loop protein BrxC | |||
19900 | RM | StyUK1IV (100% identity) | GATCAG | Sen0292ORF19900P |
19905 | AAA family ATPase | |||
plasmid pR18.0292_200k | ||||
24180 | 100 aa hypothetical protein | |||
24185 | M | M.YrupYR1ORFCP (100% identity) | CCNGG | M.Sen0292ORF24185P |
24190 | 143 aa hypothetical protein | |||
plasmid pR18.0292_89k | ||||
24485 | 103 aa hypothetical protein | |||
24490 | M | M.Kpni15bORF4996P (100% identity) | M.Sen0292ORF24490P | |
24495 | 73 aa hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
5670 | GTPase family protein | |||
5675 | M | M.SenXSKORFDP (100% identity) | CACCGT | M.Sen0292ORF5675P |
5680 | R | SenXSKORFDP (100% identity) | CACCGT | Sen0292ORF5675P |
5685 | inovirus Gp2 family protein | |||
17190 | small effector SsaA | |||
17195 | R | StyUK1IP (99% identity) | CAGAG | Sen0292ORF17200P |
17200 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen0292ORF17200P |
17205 | MFS transporter | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
19730 | BrnT family toxin | |||
19735 | R | StyUK1MrrP (100% identity) | Sen0292MrrP | |
19740 | type I restriction-modification system |