Salmonella enterica subsp. enterica serovar Newport R18.0234 |
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Putative Salmonella enterica subsp. enterica serovar Newport R18.0234 RM systems
Ref: Chiou,C.S. et al. unpublished
REBASE ref # 34932
| Sequence length: | GenBank #: | |
| Chromosome: | 4,730,593 bp | CP100744 |
| plasmid pR18.0234_299k: | 299,493 bp | CP100745 |
REBASE acronym: Sen0234
Org_num: 60502
All begin FGU68_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19455 | 322 aa hypothetical protein | |||
| 19460 | R | Sen0287ORF19520P (100% identity) | GACNNNNNNNRTCC | Sen0234ORF19465P |
| 19465 | M | M.SenS3ORF11567P (100% identity) | GACNNNNNNNRTCC | M.Sen0234ORF19465P |
| 19470 | S | S.SenS3ORF11567P (100% identity) | GACNNNNNNNRTCC | S.Sen0234ORF19465P |
| 19475 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1745 | cell division protein DamX | |||
| 1750 | M | M.StyTDamP (100% identity) | GATC | M.Sen0234DamP |
| 1755 | ribulose-phosphate 3-epimerase | |||
| 3125 | DUF2732 domain-containing protein | |||
| 3130 | M | M.Sen82356ORFDP (100% identity) | GATC | M.Sen0234ORF3130P |
| 3135 | replication endonuclease | |||
| 5560 | helix-turn-helix domain-containing protein | |||
| 5565 | M | M.SenWT281ORF6055P (100% identity) | M.Sen0234ORF5565P | |
| 5570 | AAA family ATPase | |||
| 5615 | PerC family transcriptional regulator | |||
| 5620 | M | M.Sen0287ORF5600P (100% identity) | M.Sen0234ORF5620P | |
| 5625 | RusA family crossover junction | |||
| 9100 | phosphohydrolase | |||
| 9105 | M | M.SenLiv11DcmP (100% identity) | CCWGG | M.Sen0234DcmP |
| 9110 | V | V.SenS50DcmP (100% identity) | V.Sen0234DcmP | |
| 9115 | drug/metabolite exporter YedA | |||
| 19595 | YebC/PmpR family DNA-binding transcriptional | |||
| 19600 | R | SenZYXORFBP (100% identity) | Sen0234ORF19600P | |
| 19605 | sce7725 family protein | |||
| plasmid pR18.0234_299k | ||||
| 23505 | 55 aa hypothetical protein | |||
| 23510 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.Sen0234ORF23510P |
| 23515 | thermonuclease family protein | |||
| 24235 | 48 aa hypothetical protein | |||
| 24240 | M | M.YpsF1ORFBP (100% identity) | M.Sen0234ORF24240P | |
| 24245 | 202 aa hypothetical protein | |||
| 24415 | DNA-binding protein | |||
| 24420 | M | M.SenBL10ORFDP (100% identity) | M.Sen0234ORF24420P | |
| 24425 | 277 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17270 | small effector SsaA | |||
| 17275 | R | Ssp6947IIP (100% identity) | CAGAG | Sen0234ORF17280P |
| 17280 | M | M.SenZYXORFDP (100% identity) | CAGAG | M.Sen0234ORF17280P |
| 17285 | MFS transporter | |||