Escherichia coli LH09-a |
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Putative Escherichia coli LH09-a RM systems
Ref: Biggel,M. unpublished
REBASE ref # 31800
| Sequence length: | GenBank #: | |
| Chromosome: | 4,679,910 bp | CP100544 |
| plasmid pLH09-a-B: | 112,664 bp | CP100546 |
| plasmid pLH09-a-C: | 111,271 bp | CP100547 |
| plasmid pLH09-a-D: | 92,693 bp | CP100548 |
REBASE acronym: EcoLH09a
Org_num: 60137
All begin NLZ06_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17420 | UvrD-helicase domain-containing protein | |||
| 17425 | R | Sso8ORF18020P (100% identity) | EcoLH09aORF17440P | |
| 17430 | DUF4268 domain-containing protein | |||
| 17435 | S | S.EcoVAORFGP (100% identity) | S.EcoLH09aORF17440P | |
| 17440 | M | M.KpnEGKP3ORF20260P (100% identity) | M.EcoLH09aORF17440P | |
| 17445 | anti-phage defense ZorAB system protein ZorA | |||
| 19145 | 322 aa hypothetical protein | |||
| 19150 | R | SflN101ORF11675P (100% identity) | CCANNNNNNNNNTTGG | EcoLH09aORF19155P |
| 19155 | M | M.SspS13ORF3945P (100% identity) | CCANNNNNNNNNTTGG | M.EcoLH09aORF19155P |
| 19160 | S | S.SflN101ORF11675P (100% identity) | CCANNNNNNNNNTTGG | S.EcoLH09aORF19155P |
| 19165 | endoribonuclease SymE | |||
| plasmid pLH09-a-D | ||||
| 24605 | 3-phosphatase | |||
| 24610 | R | EcoIMP163ORFBP (100% identity) | EcoLH09aORF24620P | |
| 24615 | S | S.EcoIMP163ORFBP (100% identity) | S.EcoLH09aORF24620P | |
| 24620 | M | M.EcoIMP163ORFBP (99% identity) | M.EcoLH09aORF24620P | |
| 24625 | type II toxin-antitoxin system Phd/YefM family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1695 | cell division protein DamX | |||
| 1700 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoLH09aDamP |
| 1705 | ribulose-phosphate 3-epimerase | |||
| 2250 | DUF2556 family protein | |||
| 2255 | M | M.Ecostr16ORFAP (100% identity) | ATGCAT | M.EcoLH09aORF2255P |
| 2260 | DNA-binding transcriptional regulator Fis | |||
| 7535 | PerC family transcriptional regulator | |||
| 7540 | M | M.EcoXH990ORF8990P (100% identity) | GATC | M.EcoLH09aORF7540P |
| 7545 | LexA family transcriptional regulator | |||
| plasmid pLH09-a-B | ||||
| 23315 | 103 aa hypothetical protein | |||
| 23320 | M | M.StyR64ORFAP (100% identity) | M.EcoLH09aORF23320P | |
| 23325 | 73 aa hypothetical protein | |||
| plasmid pLH09-a-D | ||||
| 24490 | recombination-associated protein RdgC | |||
| 24495 | M | M.EcoTHO010ORF40010P (100% identity) | M.EcoLH09aORF24495P | |
| 24510 | tellurite/colicin resistance protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pLH09-a-C | ||||
| 24255 | 76 aa hypothetical protein | |||
| 24260 | M | M.Sso524ORF460P (99% identity) | M.EcoLH09aORF24260P | |
| 24265 | 269 aa hypothetical protein | |||