Escherichia coli LH10-b-1 |
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Putative Escherichia coli LH10-b-1 RM systems
Ref: Biggel,M. unpublished
REBASE ref # 31800
Complete sequence: 4,907,133 bp
GenBank #: CP100530
REBASE acronym: EcoLH10b1
Org_num: 60138
All begin NLZ08_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 20555 | adenine/cytosine-specific restriction | |||
| 20560 | R | EcoPK5ORF19090P (100% identity) | EcoLH10b1ORF20565P | |
| 20565 | M | M.EcoPK5ORF19090P (100% identity) | M.EcoLH10b1ORF20565P | |
| 20570 | S | S.EcoPK5ORF19090P (99% identity) | S.EcoLH10b1ORF20565P | |
| 20575 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1715 | cell division protein DamX | |||
| 1720 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoLH10b1DamP |
| 1725 | ribulose-phosphate 3-epimerase | |||
| 2350 | DUF2556 family protein | |||
| 2355 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.EcoLH10b1ORF2355P |
| 2360 | DNA-binding transcriptional regulator Fis | |||
| 9260 | phosphohydrolase | |||
| 9265 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.EcoLH10b1DcmP |
| 9270 | V | V.SsoSE61DcmP (99% identity) | V.EcoLH10b1DcmP | |
| 9275 | drug/metabolite exporter YedA | |||
| 15980 | replication endonuclease | |||
| 15985 | M | M.Ema605ORF7185P (98% identity) | GATC | M.EcoLH10b1ORF15985P |
| 15990 | DUF3850 domain-containing protein | |||
| 23950 | 71 aa hypothetical protein | |||
| 23955 | M | M.EcoPK8275ORF4990P (100% identity) | M.EcoLH10b1ORF23955P | |
| 23960 | helix-turn-helix domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20550 | GTPase | |||
| 20555 | R | SenHNK130MrrP (100% identity) | EcoLH10b1MrrP | |
| 20560 | type I restriction-modification system | |||