Escherichia coli LH99-c |
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Putative Escherichia coli LH99-c RM systems
Ref: Biggel,M. unpublished
REBASE ref # 31800
Complete sequence: 4,701,739 bp
GenBank #: CP100597
REBASE acronym: EcoLH99c
Org_num: 60141
All begin NL670_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5430 | IS1 family transposase | |||
| 5435 | R | EcoSF10ORF5825P (54% identity) | EcoLH99cORF5435P | |
| 5440 | M48 family metallopeptidase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4865 | TrmB family transcriptional regulator | |||
| 4870 | M | M.Eco44C11ORF12390P (100% identity) | M.EcoLH99cORF4870P | |
| 4885 | phage holin family protein | |||
| 5155 | phosphohydrolase | |||
| 5160 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.EcoLH99cDcmP |
| 5165 | V | V.EcoM1881DcmP (100% identity) | V.EcoLH99cDcmP | |
| 5170 | drug/metabolite exporter YedA | |||
| 10200 | phage holin family protein | |||
| 10210 | M | M.EcoPSS15ORF28880P (100% identity) | M.EcoLH99cORF10210P | |
| 10215 | TrmB family transcriptional regulator | |||
| 18465 | phage portal protein | |||
| 18470 | R | Eho218ORF15P (100% identity) | GTCGAC | EcoLH99cORF18475P |
| 18475 | M | M.SflFF22ORF10P (100% identity) | GTCGAC | M.EcoLH99cORF18475P |
| 18480 | replication endonuclease | |||
| 21305 | cell division protein DamX | |||
| 21310 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoLH99cDamP |
| 21315 | ribulose-phosphate 3-epimerase | |||
| 21930 | DUF2556 family protein | |||
| 21935 | M | M.EcoM1881ORF2275P (100% identity) | ATGCAT | M.EcoLH99cORF21935P |
| 21940 | DNA-binding transcriptional regulator Fis | |||