Pseudomonas species KHPS1 |
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Putative Pseudomonas species KHPS1 RM systems
Ref: Hillmann,K.B. and Niehaus,T.D. unpublished
REBASE ref # 34871
Complete sequence: 5,061,778 bp
GenBank #: CP100551
REBASE acronym: PspKHPS1
Org_num: 60253
All begin NLY39_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 785 | NADP-dependent succinate-semialdehyde | |||
| 795 | R | Pla190ORF665P (97% identity) | PspKHPS1ORF810P | |
| 800 | S | S.Nsp212ORF430P (43% identity) | S.PspKHPS1ORF810P | |
| 805 | DNA damage-inducible protein D | |||
| 810 | M | M.Pla190ORF665P (96% identity) | M.PspKHPS1ORF810P | |
| 815 | 89 aa hypothetical protein | |||
| 5960 | peptidase M15 | |||
| 5965 | M | M.PspD7DI (96% identity) | M.PspKHPS1ORF5965P | |
| 5970 | S | S.Psp2813ORF24495P (66% identity) | S.PspKHPS1ORF5965P | |
| 5975 | AAA family ATPase | |||
| 5980 | McrC family protein | |||
| 5985 | DUF3320 domain-containing protein | |||
| 5990 | R | Pst875ORF7280P (99% identity) | PspKHPS1ORF5965P | |
| 5995 | tyrosine-type recombinase/integrase | |||
| 7540 | AbrB/MazE/SpoVT family DNA-binding | |||
| 7545 | M | M.PstJ15ORF12155P (95% identity) | M.PspKHPS1ORF7545P | |
| 7550 | S | S.PspHL1ORF3763P (64% identity) | S.PspKHPS1ORF7545P | |
| 7555 | 314 aa hypothetical protein | |||
| 7560 | 175 aa hypothetical protein | |||
| 7565 | R | PalMRCP2ORFHP (96% identity) | PspKHPS1ORF7545P | |
| 7570 | M48 family metallopeptidase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 18300 | DEAD/DEAH box helicase | |||
| 18305 | RM | PmeMAE1KORF6840P (100% identity) | PspKHPS1ORF18305P | |
| 18310 | chromosome segregation protein SMC | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5970 | restriction endonuclease subunit S | |||
| 5975 | R | Pst875McrBP (100% identity) | PspKHPS1McrBP | |
| 5980 | R | Pst17588McrCP (96% identity) | PspKHPS1McrCP | |
| 5985 | DUF3320 domain-containing protein | |||