Clostridium species MD294 ASF356 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Clostridium species MD294 ASF356 RM systems
Ref: Wannemuehler,M.J. et al. Genome Announc 2 (2), e00287-14 (2014)
REBASE ref # 17532
Complete sequence: 2,924,599 bp
GenBank #: CP097810
REBASE acronym: Csp356
Org_num: 12830
All begin C820_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2402 | 3-aminobutyryl-CoA ammonia lyase | |||
| 2403 | R | PmeBin164ORFBP (82% identity) | Csp356ORF155P | |
| 2404 | S | S.Ssp29892ORF7470P (42% identity) | S3.Csp356ORF155P | |
| 2405 | S | S2.PmeBin175ORFGP (41% identity) | S2.Csp356ORF155P | |
| 2406 | S | S1.PmeBin164ORFBP (54% identity) | S1.Csp356ORF155P | |
| 2407 | M | M.PmeBin172ORFHP (84% identity) | M.Csp356ORF155P | |
| 2409 | Biosynthetic peptidoglycan transglycosylase | |||
| 2441 | 296 aa hypothetical protein | |||
| 2442 | R | Rga19829ORF7420P (65% identity) | Csp356ORF117P | |
| 2443 | 60 aa hypothetical protein | |||
| 2444 | S | S3.Tsu2489ORF1099P (55% identity) | S.Csp356ORF117P | |
| 2445 | M | M.DfeGSS09ORF9075P (74% identity) | M.Csp356ORF117P | |
| 2446 | Adenosine deaminase | |||
| 2571 | 145 aa hypothetical protein | |||
| ??? | R | EliB2IP (78% identity) | Csp356ORF2049P | |
| 2574 | 175 aa hypothetical protein | |||
| 2575 | S | S1.CgaBS1III (65% identity) | S.Csp356ORF2049P | |
| 2576 | 139 aa hypothetical protein | |||
| 2577 | 96 aa hypothetical protein | |||
| 2578 | M | M.Bsp2032II (85% identity) | M.Csp356ORF2049P | |
| 2579 | 77 aa hypothetical protein | |||
| 2766 | 120 aa hypothetical protein | |||
| 2767 | R | AspmYitORF746P (59% identity) | Csp356ORF1855P | |
| 2768 | 192 aa hypothetical protein | |||
| 2767 | Type I restriction enzyme R protein | |||
| 2768 | S | S.Csp356ORF1855P (86% identity) | S2.Csp356ORF1853P | |
| 2769 | S | S.Csp356ORF1853P (88% identity) | S1.Csp356ORF1853P | |
| 2770 | M | M.CspC1ORF1820P (76% identity) | M.Csp356ORF1853P | |
| 2771 | 77 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1204 | 77 aa hypothetical protein | |||
| 1205 | RM | PmeBin165ORFFP (60% identity) | CAGCAG | Csp356ORF2094P |
| 1206 | 259 aa hypothetical protein | |||
| 1244 | 156 aa hypothetical protein | |||
| 1245 | M | M.Msp190616ORF1720P (46% identity) | GANTC | M.Csp356ORF2855P |
| 1449 | Tryptophan--tRNA ligase | |||
| 1450 | M | M2.Lsp684ORF645P (58% identity) | GASTC | M.Csp356ORF2650P |
| 1451 | 290 aa hypothetical protein | |||
| 1976 | 88 aa hypothetical protein | |||
| 1977 | M | M.Bla1821LORF21485P (39% identity) | CTSAG | M.Csp356ORF589P |
| 1978 | 226 aa hypothetical protein | |||
| 2224 | Thioredoxin reductase | |||
| 2225 | M | M.SpaNN1ORF3235P (39% identity) | M.Csp356ORF2225P | |
| 2226 | 285 aa hypothetical protein | |||
| 2310 | 3-phosphoshikimate 1-carboxyvinyltransferase 1 | |||
| 2311 | M | M2.Csp356ORF2011P (72% identity) | M.Csp356ORF252P | |
| 2312 | 225 aa hypothetical protein | |||
| 2613 | 213 aa hypothetical protein | |||
| 2614 | M | M.Csp356ORF252P (72% identity) | M2.Csp356ORF2011P | |
| 2615 | 226 aa hypothetical protein | |||
| 2616 | M | M.PmeBin461ORFBP (65% identity) | M1.Csp356ORF2011P | |
| 2617 | 87 aa hypothetical protein | |||
| 2727 | 262 aa hypothetical protein | |||
| 2728 | M | M.PmeBin537ORFCP (94% identity) | CTSAG | M.Csp356ORF1896P |
| 2729 | 124 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 231 | 172 aa hypothetical protein | |||
| 232 | R | RspKB18GmrSDP (40% identity) | Csp356GmrSDP | |
| 233 | 247 aa hypothetical protein | |||
| 2828 | PIN and TRAM-domain containing protein | |||
| 2829 | R | Lla161McrBP (56% identity) | Csp356McrBP | |
| 2830 | R | Msp3756McrCP (63% identity) | Csp356McrCP | |
| 2831 | 23S rRNA (uracil-C(5))-methyltransferase RlmCD | |||