Escherichia coli Z0117EC0116 |
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Putative Escherichia coli Z0117EC0116 RM systems
Ref: Yoon,E.-J. et al. unpublished
REBASE ref # 34694
| Sequence length: | GenBank #: | |
| Chromosome: | 4,933,942 bp | CP098192 |
| plasmid pZ0117ECO0116-2: | 67,947 bp | CP098194 |
REBASE acronym: Eco0116
Org_num: 59600
All begin NBY24_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20775 | 128 aa hypothetical protein | |||
| 20780 | M | M.EcoMS851ORF22160P (100% identity) | GTCANNNNNTTC | M.Eco0116ORF20780P |
| 20785 | S | S.EcoMS851ORF22160P (99% identity) | GTCANNNNNTTC | S.Eco0116ORF20780P |
| 20790 | 428 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1890 | cell division protein DamX | |||
| 1895 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco0116DamP |
| 1900 | ribulose-phosphate 3-epimerase | |||
| 4605 | integrase | |||
| 4610 | M | M.SflFF80ORF21000P (100% identity) | YGGCCR | M.Eco0116ORF4610P |
| 4615 | R | SflFF80ORF21000P (100% identity) | YGGCCR | Eco0116ORF4610P |
| 4620 | IS3 family transposase | |||
| 9855 | HD domain-containing protein | |||
| 9860 | M | M.Ecoppa8DcmP (100% identity) | CCWGG | M.Eco0116DcmP |
| 9865 | V | V.SflSTLE3DcmP (100% identity) | CCWGG | V.Eco0116DcmP |
| 9870 | drug/metabolite exporter YedA | |||
| 15420 | replication endonuclease | |||
| 15425 | M | M.Eco005ORF16080P (100% identity) | GATC | M.Eco0116ORF15425P |
| 15430 | TraR/DksA family transcriptional regulator | |||
| 18875 | LexA family transcriptional regulator | |||
| 18880 | M | M.SflFF80ORF18305P (100% identity) | GATC | M.Eco0116ORF18880P |
| 18885 | PerC family transcriptional regulator | |||
| 20755 | HNH endonuclease | |||
| 20760 | R | EcoMS851ORF22140P (100% identity) | Eco0116ORF20760P | |
| 20765 | AAA family ATPase | |||
| plasmid pZ0117ECO0116-2 | ||||
| 24965 | 73 aa hypothetical protein | |||
| 24970 | M | M.Xca80ORFEP (100% identity) | M.Eco0116ORF24970P | |
| 24975 | 97 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20760 | HNH endonuclease | |||
| 20765 | R | EcoMS851McrBP (100% identity) | Eco0116McrBP | |
| 20770 | R | Ecows53McrCP (100% identity) | Eco0116McrCP | |
| 20775 | 128 aa hypothetical protein | |||