Pseudoalteromonas species SCSIO 43088 |
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Putative Pseudoalteromonas species SCSIO 43088 RM systems
Ref: Tang,K. and Wang,X. Sci China Earth Sci 63 (1), 157-166 (2019)
REBASE ref # 33753
| Sequence length: | GenBank #: | |
| chromosome 1: | 3,894,662 bp | CP072675 |
| chromosome 2: | 906,921 bp | CP072676 |
REBASE acronym: Psp43088
Org_num: 59700
All begin J8Z28_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 4945 | WYL domain-containing protein | |||
| 4950 | M | M.Psp1033ORF2670P (95% identity) | M.Psp43088ORF4950P | |
| 4955 | S | S.Vgi22741ORFFP (52% identity) | S.Psp43088ORF4950P | |
| 4960 | DUF262 domain-containing protein | |||
| 4965 | DUF262 domain-containing protein | |||
| 4970 | NERD domain-containing protein | |||
| 4975 | 470 aa hypothetical protein | |||
| 4980 | R | Pma15914ORF6155P (97% identity) | Psp43088ORF4950P | |
| 4985 | anti-phage defense ZorAB system ZorA | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 2520 | AAA family ATPase | |||
| 2525 | M | M.PstP18ORF771P (100% identity) | GATC | M.Psp43088DamP |
| 2530 | DUF2970 domain-containing protein | |||
| 3145 | helix-turn-helix transcriptional regulator | |||
| 3150 | M | M.Val64140ORF3435P (99% identity) | M.Psp43088ORF3150P | |
| 3155 | S | S.TlaWSORF19535P (59% identity) | S.Psp43088ORF3150P | |
| 3160 | protein kinase | |||
| 7585 | 76 aa hypothetical protein | |||
| 7590 | M | M.PspPS1M3ORF19320P (69% identity) | M.Psp43088ORF7590P | |
| 7595 | single-stranded DNA-binding protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 13260 | 59 aa hypothetical protein | |||
| 13265 | R | Vfl560ORFBP (99% identity) | Psp43088ORF13270P | |
| 13270 | M | M.EcoHS301ORF23870P (98% identity) | M.Psp43088ORF13270P | |
| 13275 | DUF4391 domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 2 | ||||
| 18650 | class I SAM-dependent methyltransferase | |||
| 18655 | R | PrhCg6ORFHP (85% identity) | Psp43088ORF18655P | |
| 18660 | 244 aa hypothetical protein | |||
| 18660 | 244 aa hypothetical protein | |||
| 18665 | R | PstP18ORF3207P (98% identity) | Psp43088ORF18665P | |
| 18670 | NERD domain-containing protein | |||