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Putative Neisseria gonorrhoeae CT530 RM systems
Ref: Nokchan,N. et al. unpublished
REBASE ref # 34661
Complete sequence: 2,169,323 bp
GenBank #: CP048254
REBASE acronym: NgoCT530
Org_num: 59412
All begin GYN04_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
2060 | ADP-glyceromanno-heptose 6-epimerase | |||
2065 | M | M.Ngos1291ORF7750P (100% identity) | GCANNNNNNNGTC | M.NgoCT530ORF2065P |
2070 | DNA damage-inducible protein D | |||
2075 | S | S.NgoWNII (100% identity) | GCANNNNNNNGTC | S.NgoCT530ORF2065P |
2080 | R | NgoWNIIP (100% identity) | GCANNNNNNNGTC | NgoCT530ORF2065P |
2085 | ATP-dependent Clp protease ATP-binding subunit | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
30 | leucine--tRNA ligase | |||
35 | R | Ngos1291ORF5750P (100% identity) | GATC | NgoCT530ORF35P |
40 | DNA adenine methylase | |||
40 | DNA adenine methylase | |||
??? | M | M.NgoWPORF8P (100% identity) | GATC | M.NgoCT530ORF45P |
55 | 184 aa hypothetical protein | |||
1535 | phenylalanine--tRNA ligase subunit alpha | |||
1540 | V | V.NgoWSORF391P (100% identity) | V.NgoCT530ORF1545P | |
??? | M | M.NgoWSORF391P (100% identity) | CCGG | M.NgoCT530ORF1545P |
1555 | R | Npo18661ORFHP (100% identity) | CCGG | NgoCT530ORF1545P |
1560 | phenylalanine--tRNA ligase subunit beta | |||
1830 | SAM-dependent DNA methyltransferase | |||
1835 | S | S.NgoWSORF450P (100% identity) | GACNNNNNTGA | S.NgoCT530ORF1835P |
1840 | 140 aa hypothetical protein | |||
1860 | uroporphyrinogen decarboxylase | |||
1865 | H | H.Ngos1291ORF7560P (100% identity) | H.NgoCT530ORF1875P | |
1870 | R | Ngos1291ORF7560P (100% identity) | GCSGC | NgoCT530ORF1875P |
1875 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.NgoCT530ORF1875P |
1880 | DNA repair protein RadA | |||
3370 | 3-isopropylmalate dehydrogenase | |||
3375 | R | Ngos1291ORF9120P (100% identity) | GGNNCC | NgoCT530ORF3380P |
3380 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.NgoCT530ORF3380P |
3385 | 3-isopropylmalate dehydratase small subunit | |||
4300 | anthranilate synthase component I | |||
4305 | M | M.Ngos1291ORF10080P (100% identity) | GCCGGC | M.NgoCT530ORF4305P |
4310 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | NgoCT530ORF4305P |
4315 | 5-(carboxyamino)imidazole ribonucleotide | |||
5630 | replication initiation factor | |||
5635 | V | V.Ngos1291ORF65P (100% identity) | V.NgoCT530ORF5645P | |
5640 | R | Ngos1291ORF65P (100% identity) | CCGG | NgoCT530ORF5645P |
??? | M | M.NgoSH240ORFLP (100% identity) | CCGG | M.NgoCT530ORF5645P |
5655 | type IV pilin protein | |||
5830 | excinuclease ABC subunit UvrA | |||
??? | R | Ngos1291ORF260P (100% identity) | CCGCGG | NgoCT530ORF5840P |
5840 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.NgoCT530ORF5840P |
5845 | transposase | |||
9005 | FUSC family protein | |||
9010 | R | Ngos1291ORF3515P (100% identity) | GGCC | NgoCT530ORF9015P |
9015 | M | M.Ngos1291ORF3515P (100% identity) | GGCC | M.NgoCT530ORF9015P |
9020 | ribosome recycling factor | |||
9525 | sodium/glutamate symporter | |||
9530 | R | NgoPID18ORF1848P (100% identity) | GGTGA | NgoCT530ORF9535P |
9535 | M | M1.Ngos1291II (100% identity) | GGTGA | M1.NgoCT530ORF9535P |
9540 | M | M2.Ngos1291II (100% identity) | GGTGA | M2.NgoCT530ORF9535P |
9545 | RNA-binding transcriptional accessory protein | |||
10095 | GTPase ObgE | |||
10100 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.NgoCT530ORF10100P |
10105 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | NgoCT530ORF10100P |
10110 | cysteine--tRNA ligase | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
2740 | peptidyl-prolyl cis-trans isomerase | |||
2745 | M | M.Ngos1291ORF8455P (100% identity) | CCACC | M.NgoCT530ORF2745P |
2750 | R | Ngos1291ORF8455P (100% identity) | CCACC | NgoCT530ORF2745P |
2755 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
3190 | alpha-hydroxy-acid oxidizing protein | |||
3195 | R | NgoCT602ORF3210P (100% identity) | NgoCT530ORF3200P | |
??? | M | M.NgoSW0032ORF3245P (80% identity) | M.NgoCT530ORF3200P | |
3210 | tRNA pseudouridine(55) synthase TruB |