Klebsiella pneumoniae isolate 5002 |
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Putative Klebsiella pneumoniae isolate 5002 RM systems
Ref: Alioto,T. et al. unpublished
REBASE ref # 33419
| Sequence length: | GenBank #: | |
| chromosome main: | 5,373,542 bp | OW968215 |
| plasmid P1: | 303,297 bp | OW968216 |
| plasmid P2: | 239,351 bp | OW968217 |
REBASE acronym: Kpn5002
Org_num: 58791
All begin AI2974V1_, AI2974V1_REPA
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome main | ||||
| 4567 | 75 aa hypothetical protein | |||
| 4568 | M | M1.Kpni307xORF4287P (100% identity) | M1.Kpn5002ORF4568AP | |
| 17 | pseudogene | |||
| 5 | IS3 family transposase | |||
| 4569 | 131 aa hypothetical protein | |||
| 4570 | 293 aa hypothetical protein | |||
| 4571 | M | M1.Kpni307zORF4416P (37% identity) | M1.Kpn5002ORF4568BP | |
| 4572 | M | M2.KpnsST307aORF23170P (100% identity) | M2.Kpn5002ORF4568P | |
| 4573 | S | S.KpnsST307aORF23170P (100% identity) | S.Kpn5002ORF4568P | |
| 4574 | R | KpnsST307aORF23170P (100% identity) | Kpn5002ORF4568P | |
| 4575 | 32 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome main | ||||
| 347 | Cell division protein DamX | |||
| 348 | M | M.KpnstKP6DamP (100% identity) | GATC | M.Kpn5002DamP |
| 349 | Ribulose-phosphate 3-epimerase | |||
| 1388 | 317 aa hypothetical protein | |||
| 1389 | M | M.KpnstKP6ORF2850P (100% identity) | GATC | M.Kpn5002ORF1389P |
| 1390 | Crossover junction endodeoxyribonuclease RusA | |||
| 1715 | 235 aa hypothetical protein | |||
| 1716 | M | M.KspC31ORFBP (97% identity) | CCWGG | M.Kpn5002DcmP |
| 1717 | V | V.Ksp2N3ORFEP (75% identity) | V.Kpn5002DcmP | |
| 1718 | inner membrane transporter YedA | |||
| 3071 | 124 aa hypothetical protein | |||
| ??? | M | M.KpnsST307ORF16100P (100% identity) | M.Kpn5002ORF3072P | |
| 3073 | 879 aa hypothetical protein | |||
| 3077 | 57 aa hypothetical protein | |||
| 3078 | M | M.KpnsST307ORF16130P (100% identity) | M.Kpn5002ORF3078P | |
| 3079 | 192 aa hypothetical protein | |||
| 3267 | 804 aa hypothetical protein | |||
| 3268 | M | M.Kpni307zORF3341P (100% identity) | GATC | M.Kpn5002ORF3268P |
| 3269 | 75 aa hypothetical protein | |||
| 3743 | 52 aa hypothetical protein | |||
| 3744 | M | M.Kpni307bhORF3745P (100% identity) | M.Kpn5002ORF3744P | |
| 3745 | 256 aa hypothetical protein | |||
| 4600 | 677 aa hypothetical protein | |||
| 4601 | R | KpnstKP6ORF18305P (100% identity) | Kpn5002ORF4601P | |
| 4602 | Beta-xylosidase | |||
| plasmid P1 | ||||
| 5273 | DNA replication protein DnaC | |||
| 5274 | M | M.PgeFB2ORFCP (100% identity) | CCWGG | M.Kpn5002ORF5274P |
| 5275 | R | PgeFB2ORFCP (100% identity) | CCWGG | Kpn5002ORF5274P |
| 5276 | 82 aa hypothetical protein | |||
| plasmid P2 | ||||
| 128 | 293 aa hypothetical protein CJD35_20465 | |||
| 5454 | R | YpsR1ORFAP (99% identity) | CCWGG | Kpn5002ORF5455P |
| 5455 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.Kpn5002ORF5455P |
| 121 | IS1 family transposase | |||