Pseudomonas avellanae NCPPB 3491 |
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Putative Pseudomonas avellanae NCPPB 3491 RM systems
Ref: Turco,S. et al. J Phytopathol (1986) (2022) In press
REBASE ref # 34600
| Sequence length: | GenBank #: | |
| Chromosome: | 6,217,249 bp | CP091143 |
| plasmid p1NCPPB3491: | 105,919 bp | CP091144 |
| plasmid p2NCPPB3491: | 87,243 bp | CP091145 |
REBASE acronym: Pav3491
Org_num: 58817
All begin L2Y00_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 15205 | 102 aa hypothetical protein | |||
| 15210 | R | PspA214ORF1437P (85% identity) | Pav3491ORF15245P | |
| 15215 | winged helix-turn-helix transcriptional | |||
| 15220 | IS630-like element ISPsy32 family transposase | |||
| 15225 | IS5 family transposase | |||
| 15230 | S | S.AfeSS3ORF2252P (19% identity) | S2.Pav3491ORF15245P | |
| 15235 | IS30-like element ISPsy38 family transposase | |||
| 15240 | S | S.PspA214ORF1437P (37% identity) | S1.Pav3491ORF15245P | |
| 15245 | M | M.Pvi1779ORF5040P (30% identity) | M.Pav3491ORF15245P | |
| 15250 | IS3 family transposase | |||
| plasmid p1NCPPB3491 | ||||
| 28440 | 129 aa hypothetical protein | |||
| 28445 | M | M.PsytsORFGP (92% identity) | M.Pav3491ORF28445P | |
| 28450 | S | S.PspLH21ORF3540P (44% identity) | S.Pav3491ORF28445P | |
| 28455 | PDDEXK nuclease domain-containing protein | |||
| 28460 | R | Psy63IP (96% identity) | Pav3491ORF28445P | |
| 28465 | 162 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4420 | 129 aa hypothetical protein | |||
| 4425 | M | M.Pav3491ORF27330P (100% identity) | M.Pav3491ORF4425P | |
| 4430 | 847 aa hypothetical protein | |||
| 18930 | 214 aa hypothetical protein | |||
| 18935 | M | M.Psy4091ORF9885P (98% identity) | M.Pav3491ORF18935P | |
| 18940 | glycoside hydrolase family 19 protein | |||
| 24710 | TIGR03757 family integrating conjugative element | |||
| 24715 | RM | PsyA9ORF3327P (99% identity) | Pav3491ORF24715P | |
| 24720 | DEAD/DEAH box helicase | |||
| plasmid p2NCPPB3491 | ||||
| 28955 | IS21 family transposase | |||
| 28960 | M | M.Pce963ORF200105P (96% identity) | M.Pav3491ORF28960P | |
| 28965 | R | Pav4222ORF27540P (100% identity) | Pav3491ORF28960P | |
| 28970 | Tn3 family transposase | |||