Bifidobacterium adolescentis NB2B-16-TSAB |
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Putative Bifidobacterium adolescentis NB2B-16-TSAB RM systems
Ref: Spreafico,A. et al. Nat Cancer (2022) In press
REBASE ref # 34529
Complete sequence: 2,492,529 bp
GenBank #: CP097281
REBASE acronym: BadTSAB
Org_num: 58352
All begin M5E83_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3470 | restriction endonuclease subunit S | |||
| 3475 | M | M.BadP2P3ORF3435P (99% identity) | M.BadTSABORF3475P | |
| 3480 | S | S.Bad2019ORFAP (64% identity) | S1.BadTSABORF3475P | |
| 3485 | DUF3990 domain-containing protein | |||
| 3490 | 140 aa hypothetical protein | |||
| 3495 | NADAR family protein | |||
| 3500 | S | S2.Bca7ORF3290P (91% identity) | S2.BadTSABORF3475P | |
| 3505 | R | Bad2019ORFAP (98% identity) | BadTSABORF3475P | |
| 3510 | helix-turn-helix domain-containing protein | |||
| 5100 | 124 aa hypothetical protein | |||
| 5105 | S | S.Bin20214ORF14P (56% identity) | S.BadTSABORF5115P | |
| 5110 | 253 aa hypothetical protein | |||
| 5115 | M | M.Cin001ORF18030P (95% identity) | M.BadTSABORF5115P | |
| 5120 | R | Cin001ORF18030P (88% identity) | BadTSABORF5115P | |
| 5125 | recombinase family protein | |||
| 8490 | tyrosine-type recombinase/integrase | |||
| 8495 | S | S2.Bad2019ORFDP (46% identity) | S2.BadTSABORF8505P | |
| 8500 | S | S1.Bad2019ORFDP (45% identity) | S1.BadTSABORF8505P | |
| 8505 | M | M.Bad2019ORFDP (100% identity) | M.BadTSABORF8505P | |
| 8510 | R | Bad2019ORFDP (99% identity) | BadTSABORF8505P | |
| 8515 | GIY-YIG nuclease family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6000 | DNA cytosine methyltransferase | |||
| 6005 | M | M.Bbr561ORF6990P (60% identity) | M.BadTSABORF6005P | |
| 6010 | 287 aa hypothetical protein | |||
| 6030 | RusA family crossover junction | |||
| 6035 | M | M.Bfa19861ORF10220P (98% identity) | M.BadTSABORF6035P | |
| 6040 | DEAD/DEAH box helicase | |||
| 7360 | RM | Bbi3115ORF349P (94% identity) | BadTSABORF7360P | |
| 7365 | DEAD/DEAH box helicase | |||
| 10145 | 310 aa hypothetical protein | |||
| 10150 | M | M.BadTSABORF9005P (100% identity) | GACNNNGTC | M.BadTSABORF10150P |
| 10155 | type II toxin-antitoxin system RelB/DinJ family | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8750 | (deoxy)nucleoside triphosphate | |||
| 8755 | R | Bad2019ORFCP (96% identity) | BadTSABORF8755P | |
| 8760 | PH domain-containing protein | |||